RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 ESR1P03372 595 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 PABPC4LP0CB38 370 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 HSPA1AP0DMV8 641 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 HSPA1BP0DMV9 641 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CD22P20273 847 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 MAP4P27816 1152 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 PSMB9P28065 219 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ATP6V0D1P61421 351 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 RAB39AQ14964 217 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 C22orf39Q6P5X5 142 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 TICAM1Q8IUC6 712 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ZDHHC13Q8IUH4 622 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 MMAAQ8IVH4 418 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 FAM217AQ8IXS0 508 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 MICU2Q8IYU8 434 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ATG16L2Q8NAA4 619 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 UTP15Q8TED0 518 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 RAB8BQ92930 207 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 KCNC2Q96PR1 638 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 OSBPL6Q9BZF3 934 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 SPNS1Q9H2V7 528 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 RNF167Q9H6Y7 350 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CLK4Q9HAZ1 481 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ASAH2Q9NR71 780 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CCM2LQ9NUG4 571 aaPredicted RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 INTS10Q9NVR2 710 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 SMPD3Q9NY59 655 aaPredicted RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 RSL24D1Q9UHA3 163 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 GNPTGQ9UJJ9 305 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 EIF3LQ9Y262 564 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ST14Q9Y5Y6 855 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CEPT1Q9Y6K0 416 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 SPAG17Q6Q759 2223 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CHD5Q8TDI0 1954 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 PATJQ8NI35 1801 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 H0Y858 1186 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 K7EPI3 171 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 PFDN6O15212 129 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ACOX3O15254 700 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 FKTNO75072 461 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 WISP3O95389 354 aaPredicted RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 C8BP07358 591 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ANXA5P08758 320 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 C1SP09871 688 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CDK4P11802 303 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 EPORP19235 508 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 RFC2P35250 354 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 RFX3P48380 749 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ZNF135P52742 658 aaPredicted RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 MVKQ03426 396 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ELAVL2Q12926 359 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 NFE2L1Q14494 772 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CTU2Q2VPK5 515 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CYBRD1Q53TN4 286 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 RAET1GQ6H3X3 334 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 TNFAIP8L2Q6P589 184 aaPredicted RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 SLC39A5Q6ZMH5 540 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 BCDIN3DQ7Z5W3 292 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ADAMTSL2Q86TH1 951 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ZFAND4Q86XD8 727 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 LRRC49Q8IUZ0 686 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 HID1Q8IV36 788 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 STK40Q8N2I9 435 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 TFAP2CQ92754 450 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 GTF2H4Q92759 462 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 NXPE3Q969Y0 559 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 GTPBP3Q969Y2 492 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ALG14Q96F25 216 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CENPNQ96H22 339 aaPredicted RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 GPATCH1Q9BRR8 931 aaKnown RBP5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 TRMOQ9BU70 441 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CD244Q9BZW8 370 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 NTN4Q9HB63 628 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 VCX3AQ9NNX9 186 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 AGPAT4Q9NRZ5 378 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 GALNT8Q9NY28 637 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 ACTR3BQ9P1U1 418 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 RAB26Q9ULW5 256 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CA5BQ9Y2D0 317 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 TBC1D30Q9Y2I9 924 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 TRPM7Q96QT4 1865 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 CABIN1Q9Y6J0 2220 aa5.47□□□□□ -1.53
TNFSF4-202ENST00000367718 FAM92AA1XBS5 289 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 SOX14O95416 240 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 CLDN9O95484 217 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 IGHA2P01877 340 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 CTSLP07711 333 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 ANXA6P08133 673 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 IGFBP1P08833 259 aaPredicted RBP5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 ENGP17813 658 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 SDC1P18827 310 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 MSH3P20585 1137 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 SDHBP21912 280 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 DGKAP23743 735 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 CCT8P50990 548 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 RPS14P62263 151 aaKnown RBP5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 ESRRGP62508 458 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 ZNF33AQ06730 810 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 MTA1Q13330 715 aa5.46□□□□□ -1.53
TNFSF4-202ENST00000367718 ITGADQ13349 1161 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms