RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 GPR34Q9UPC5 381 aa5.17□□□□□ -1.58
RNU4-4P-201ENST00000364588 OR1A2Q9Y585 309 aa5.17□□□□□ -1.58
RNU4-4P-201ENST00000364588 SETXQ7Z333 2677 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 ZNF462Q96JM2 2506 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 CXorf51AA0A1B0GTR3 108 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 GOLGA6CA6NDK9 693 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 GOLGA6BA6NDN3 693 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 ZSCAN5CA6NGD5 496 aaPredicted RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 RASA4BC9J798 803 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 D6RAR5 112 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 H0YIZ8 118 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 EPHB6O15197 1021 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 CCP110O43303 1012 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 RASA4O43374 803 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 JTBO76095 146 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 HNRNPCP07910 306 aaKnown RBP eCLIP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 ALPIP09923 528 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 NPSP0C0P6 89 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 GOLGA6DP0CG33 693 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 KITP10721 976 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 KRT3P12035 628 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 ITIH1P19827 911 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 RFC1P35251 1148 aaPredicted RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 UGT1A5P35504 534 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 PTPN9P43378 593 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 BLKP51451 505 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 EEFSECP57772 596 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 SRP54P61011 504 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 POLR2FP61218 127 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 ELP6Q0PNE2 266 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 PTP4A2Q12974 167 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 NFATC4Q14934 902 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 CYTH1Q15438 398 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 UGP2Q16851 508 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 TMEM52BQ4KMG9 183 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 TCP11X2Q5H9J9 407 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 CFAP58Q5T655 872 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 WDR59Q6PJI9 974 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 ARCQ7LC44 396 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 STRADAQ7RTN6 431 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 SLFN11Q7Z7L1 901 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 VASH2Q86V25 355 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 GKN2Q86XP6 184 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 CAMK1DQ8IU85 385 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 RAVER1Q8IY67 606 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 MPP5Q8N3R9 675 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 FSTL5Q8N475 847 aaPredicted RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 SLC15A4Q8N697 577 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 PAF1Q8N7H5 531 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 RTL3Q8N8U3 475 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 EXD3Q8N9H8 876 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 OR1E3Q8WZA6 343 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 CENPIQ92674 756 aaPredicted RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 PDXPQ96GD0 296 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 CELF6Q96J87 481 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 TBATAQ96M53 351 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 PCDHB18PQ96TA0 734 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 APOOQ9BUR5 198 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 SELENOOQ9BVL4 669 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 STRADBQ9C0K7 418 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 MS4A7Q9GZW8 240 aaPredicted RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 VPS16Q9H269 839 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 LRRN3Q9H3W5 708 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 CLMPQ9H6B4 373 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 SUDS3Q9H7L9 328 aaPredicted RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 CXorf36Q9H7Y0 433 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 MRPL40Q9NQ50 206 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 ASH1LQ9NR48 2969 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 FAM207AQ9NSI2 230 aaPredicted RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 SEPT11Q9NVA2 429 aaKnown RBP5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 GOLGA6AQ9NYA3 693 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 ADAM22Q9P0K1 906 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 KLQ9UEF7 1012 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 MOSPD1Q9UJG1 213 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 MFHAS1Q9Y4C4 1052 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 DAAM1Q9Y4D1 1078 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 TENM4Q6N022 2769 aa5.16□□□□□ -1.58
RNU4-4P-201ENST00000364588 TMEM202A6NGA9 273 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 TMEM110-MUSTN1A8MSY1 372 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 A8MX80 341 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 B4DGG1 531 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 TARM1B6A8C7 271 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 J3KR12 359 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 TNFP01375 233 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 FESP07332 822 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 UNGP13051 313 aaPredicted RBP5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 LIPAP38571 399 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 MMP12P39900 470 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 ETV5P41161 510 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 NSFP46459 744 aaKnown RBP5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 RGRP47804 291 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 PEX5P50542 639 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 PRKAG1P54619 331 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 YBEYP58557 167 aaPredicted RBP5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 TPI1P60174 286 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 RPL7AP62424 266 aaKnown RBP5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 CYP4F2P78329 520 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 EIF3IQ13347 325 aaKnown RBP5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 MLC1Q15049 377 aa5.15□□□□□ -1.59
RNU4-4P-201ENST00000364588 LINC00303Q3SY05 128 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms