RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 C16orf70Q9BSU1 422 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 PANK2Q9BZ23 570 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 OCR1Q9BZK8 76 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 FAM207AQ9NSI2 230 aaPredicted RBP1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 IL17CQ9P0M4 197 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 NAALADL1Q9UQQ1 740 aa1.34□□□□□ -2.19
RNU6-238P-201ENST00000363313 NPIPB15A6NHN6 443 aaPredicted RBP1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 G3V2L1 256 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 EIF3FO00303 357 aaPredicted RBP1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 ELK1P19419 428 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 ICAM3P32942 547 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 MYL7Q01449 175 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 CEBPZQ03701 1054 aaKnown RBP1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 TAF10Q12962 218 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 PTPN14Q15678 1187 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 TAF12Q16514 161 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 ELFN2Q5R3F8 820 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 C9orf66Q5T8R8 295 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 ZCCHC12Q6PEW1 402 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 SARM1Q6SZW1 724 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 CDK20Q8IZL9 346 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 AVL9Q8NBF6 648 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 NFAM1Q8NET5 270 aaPredicted RBP1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 ZNF721Q8TF20 911 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 DHX58Q96C10 678 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 FAM218AQ96MZ4 157 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 RPS6KC1Q96S38 1066 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 UBAC1Q9BSL1 405 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 POLR1BQ9H9Y6 1135 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 RRP7BPQ9NSQ0 103 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 B3GAT1Q9P2W7 334 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 RHCGQ9UBD6 479 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 CRCT1Q9UGL9 99 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 STUB1Q9UNE7 303 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 ARID1AO14497 2285 aa1.33□□□□□ -2.2
RNU6-238P-201ENST00000363313 SHROOM4Q9ULL8 1493 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 HSPA8P11142 646 aaKnown RBP1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 EDNRAP25101 427 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 OR3A2P47893 321 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 PPP2R2BQ00005 443 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 GRAMD1BQ3KR37 738 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 ZSCAN23Q3MJ62 389 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 SPDYCQ5MJ68 293 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 MARC1Q5VT66 337 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 CYP20A1Q6UW02 462 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 CFAP77Q6ZQR2 320 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 H1FOOQ8IZA3 346 aaPredicted RBP1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 METTL6Q8TCB7 284 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 SPPL2AQ8TCT8 520 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 U2AF1L4Q8WU68 220 aaKnown RBP1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 ST8SIA4Q92187 359 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 EHD2Q9NZN4 543 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 ZNF69Q9UC07 566 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 DAPK2Q9UIK4 370 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 SLC13A4Q9UKG4 626 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 PLEKHA6Q9Y2H5 1048 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 GPR52Q9Y2T5 361 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 CMAHPQ9Y471 501 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 PCDHGA5Q9Y5G8 931 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 GON4LQ3T8J9 2241 aa1.32□□□□□ -2.2
RNU6-238P-201ENST00000363313 ARID2Q68CP9 1835 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 TXNL1O43396 289 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 MED24O75448 989 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 DDHD2O94830 711 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 EIF2S1P05198 315 aaKnown RBP1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 SRPRAP08240 638 aaKnown RBP1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 PRLRP16471 622 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 AOC1P19801 751 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 ELAVL4P26378 380 aaKnown RBP1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 MNDAP41218 407 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 HARS2P49590 506 aaKnown RBP1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 ATP4BP51164 291 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 ALDH3A2P51648 485 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 SRPXP78539 464 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 GCNT1Q02742 428 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 SRSF9Q13242 221 aaKnown RBP eCLIP1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 CELF3Q5SZQ8 465 aaKnown RBP1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 SLC9C2Q5TAH2 1124 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 GARNL3Q5VVW2 1013 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 TMEM198Q66K66 360 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 HIPK1Q86Z02 1210 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 CFAP206Q8IYR0 622 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 AFAP1Q8N556 730 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 FRMD1Q8N878 549 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 SLC37A3Q8NCC5 494 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 OR5M8Q8NGP6 311 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 ARHGEF2Q92974 986 aaKnown RBP1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 NEK1Q96PY6 1258 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 DNAJC18Q9H819 358 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 KRT84Q9NSB2 600 aa1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 ELF5Q9UKW6 265 aaPredicted RBP1.31□□□□□ -2.2
RNU6-238P-201ENST00000363313 IGHV3-16A0A0C4DH30 117 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 IGHV3-20A0A0C4DH32 117 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 HEPACAM2A8MVW5 462 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 ARHGEF33A8MVX0 844 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 RNF103O00237 685 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 SURF4O15260 269 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 HS6ST1O60243 411 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 MT-ND1P03886 318 aa1.3□□□□□ -2.2
RNU6-238P-201ENST00000363313 SPARCP09486 303 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms