RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 CREB3L1Q96BA8 519 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 PPP3R2Q96LZ3 170 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 COL21A1Q96P44 957 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 PEBP4Q96S96 227 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 MRPL4Q9BYD3 311 aaKnown RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ZNF436Q9C0F3 470 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ZCCHC4Q9H5U6 513 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 AKTIPQ9H8T0 292 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ZNF112Q9UJU3 913 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 FBXO10Q9UK96 956 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 PKP3Q9Y446 797 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 COL1A2P08123 1366 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 C17orf113A0A1B0GUU1 675 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 E2F3O00716 465 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 HTR3BO95264 441 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 OR56A5P0C7T3 313 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 FAM157BP0CG42 384 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 NCF1P14598 390 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 IL1RNP18510 177 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 AZGP1P25311 298 aaKnown RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 PSMA3P25788 255 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 S100PP25815 95 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 DSC1Q08554 894 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 RPS6KA2Q15349 733 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 FUT11Q495W5 492 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ERICH5Q6P6B1 374 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 CYHR1Q6ZMK1 362 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 RASSF6Q6ZTQ3 369 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 RHOUQ7L0Q8 258 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ADGRD2Q7Z7M1 963 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 SLC22A9Q8IVM8 553 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 DTWD1Q8N5C7 304 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 CAMKK1Q8N5S9 505 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 CLHC1Q8NHS4 586 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 NSMAFQ92636 917 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ISG20Q96AZ6 181 aaKnown RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ZNF669Q96BR6 464 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 TOX2Q96NM4 488 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 FCRL3Q96P31 734 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 FAM213AQ9BRX8 229 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ACTR8Q9H981 624 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 DDX4Q9NQI0 724 aaKnown RBP11.31□□□□□ -0.6
CNOT4-203ENST00000361528 PRDM9Q9NQV7 894 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 PSORS1C1Q9UIG5 152 aa11.31□□□□□ -0.6
CNOT4-203ENST00000361528 ZCWPW2A0A1B0GU75 182 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 RAB19A4D1S5 217 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 MMP20O60882 483 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 S100A8P05109 93 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 PSAPP07602 524 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 JUPP14923 745 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 LHCGRP22888 699 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 RORAP35398 523 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 YBX1P67809 324 aaKnown RBP11.3□□□□□ -0.6
CNOT4-203ENST00000361528 PUDPQ08623 228 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 VEPH1Q14D04 833 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 EIF4HQ15056 248 aaKnown RBP11.3□□□□□ -0.6
CNOT4-203ENST00000361528 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.3□□□□□ -0.6
CNOT4-203ENST00000361528 RTP2Q5QGT7 225 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 ALG1LQ6GMV1 187 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 OR7E24Q6IFN5 339 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 B3GNT9Q6UX72 402 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 DDX53Q86TM3 631 aaKnown RBP11.3□□□□□ -0.6
CNOT4-203ENST00000361528 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 ABI1Q8IZP0 508 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 HS3ST5Q8IZT8 346 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 MS4A15Q8N5U1 240 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 TMEM161BQ8NDZ6 487 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 RDM1Q8NG50 284 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 PCDH19Q8TAB3 1148 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 C9orf43Q8TAL5 461 aaPredicted RBP11.3□□□□□ -0.6
CNOT4-203ENST00000361528 CYP2W1Q8TAV3 490 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 AGAP2Q99490 1192 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 PITX2Q99697 317 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 KATNAL1Q9BW62 490 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 AMNQ9BXJ7 453 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 RNF167Q9H6Y7 350 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 FBRSL1Q9HCM7 1045 aaKnown RBP11.3□□□□□ -0.6
CNOT4-203ENST00000361528 DNAJC11Q9NVH1 559 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 PFDN2Q9UHV9 154 aa11.3□□□□□ -0.6
CNOT4-203ENST00000361528 DICER1Q9UPY3 1922 aaKnown RBP11.3□□□□□ -0.6
CNOT4-203ENST00000361528 FAM240BA0A1B0GVZ2 78 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 TRABD2BA6NFA1 517 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 DBX1A6NMT0 343 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 K7ERI5 159 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 CD3EAPO15446 510 aaKnown RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SGCEO43556 437 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SELENOFO60613 162 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 GLAP06280 429 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 HBQ1P09105 142 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 ANXA3P12429 323 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 ARSAP15289 507 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 LBPP18428 481 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 TNNI1P19237 187 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 MAPK1P28482 360 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 CLCN3P51790 818 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 RAB10P61026 200 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 EEF1A1P68104 462 aaKnown RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 EEF1A2Q05639 463 aaKnown RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SGCAQ16586 387 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SWI5Q1ZZU3 235 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms