RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 NRLP54845 237 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 CDH12P55289 794 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 RHAGQ02094 409 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 PIK3R6Q5UE93 754 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 C1orf52Q8N6N3 182 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 KBTBD7Q8WVZ9 684 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 C10orf82Q8WW14 230 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 GLYATL1Q969I3 302 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 MKKSQ9NPJ1 570 aaPredicted RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 SERINC1Q9NRX5 453 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 ZNF358Q9NW07 568 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 STON1Q9Y6Q2 735 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 BAZ2AQ9UIF9 1905 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 KAT7O95251 611 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 FADS2O95864 444 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 DBTP11182 482 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 CREB1P16220 341 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 SIM2Q14190 667 aaPredicted RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 PLEKHG4BQ96PX9 1271 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 SERTAD3Q9UJW9 196 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 SCAMP1O15126 338 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 OXTRP30559 389 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 LEPRP48357 1165 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 ARFIP1P53367 373 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 TRIM32Q13049 653 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 RBM20Q5T481 1227 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 ANO7Q6IWH7 933 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 PHOSPHO2Q8TCD6 241 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 OR2M4Q96R27 311 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 CD244Q9BZW8 370 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 GEMIN8Q9NWZ8 242 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 C19orf25Q9UFG5 118 aaPredicted RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 MAN2B2Q9Y2E5 1009 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 A0A0J9YVX5 310 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 UBE2QL1A1L167 161 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 NDUFS4O43181 175 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 KCNJ13O60928 360 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 PSMA1P25786 263 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 CTSOP43234 321 aaPredicted RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 PGDP52209 483 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 MAPK10P53779 464 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 DSTNP60981 165 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 TGFBIQ15582 683 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 DPY19L3Q6ZPD9 716 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 GOLGA7Q7Z5G4 137 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 ATCAYQ86WG3 371 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 OR56A1Q8NGH5 318 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 OR5K1Q8NHB7 308 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 TMEM40Q8WWA1 233 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 WDR92Q96MX6 357 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 SMG9Q9H0W8 520 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 MRPL39Q9NYK5 338 aaKnown RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 SIRPGQ9P1W8 387 aa13.14□□□□□ -0.31
LDB3-202ENST00000361373 NFKBIL1Q9UBC1 381 aaPredicted RBP13.14□□□□□ -0.31
LDB3-202ENST00000361373 OR5F1O95221 314 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 KLF8O95600 359 aaPredicted RBP13.13□□□□□ -0.31
LDB3-202ENST00000361373 ANGPTL1O95841 491 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 HLA-EP13747 358 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 CLCN4P51793 760 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 HMGCS1Q01581 520 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 FAM214AQ32MH5 1076 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 KLHDC10Q6PID8 442 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 SNRNP27Q8WVK2 155 aaKnown RBP13.13□□□□□ -0.31
LDB3-202ENST00000361373 NR4A3Q92570 626 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 CGREF1Q99674 301 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 GMEB2Q9UKD1 530 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 CLIC1O00299 241 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 PRAMEF12O95522 483 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 EMX2Q04743 252 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 SCARB2Q14108 478 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 DHCR24Q15392 516 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 SLC9B1Q4ZJI4 515 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 CBR4Q8N4T8 237 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 OR4F6Q8NGB9 312 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 RHEBL1Q8TAI7 183 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 TSPEARQ8WU66 669 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 EFHD2Q96C19 240 aaPredicted RBP13.13□□□□□ -0.31
LDB3-202ENST00000361373 CHID1Q9BWS9 393 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 TBL1XR1Q9BZK7 514 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 POMPQ9Y244 141 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 BEST1O76090 585 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 PGM3O95394 542 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 HMGN1P05114 100 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 CSTF2P33240 577 aaKnown RBP eCLIP13.13□□□□□ -0.31
LDB3-202ENST00000361373 MAPK11Q15759 364 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 LIN54Q6MZP7 749 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 GLIS1Q8NBF1 620 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 UXS1Q8NBZ7 420 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 IGSF8Q969P0 613 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 ARHGEF3Q9NR81 526 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 LYARQ9NX58 379 aaKnown RBP13.13□□□□□ -0.31
LDB3-202ENST00000361373 PPM1HQ9ULR3 514 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 KCNK6Q9Y257 313 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 MRPS7Q9Y2R9 242 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms