RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 SMPDL3AQ92484 453 aa21.17■□□□□ 0.98
HOXA4-201ENST00000360046 FAR2Q96K12 515 aa21.17■□□□□ 0.98
HOXA4-201ENST00000360046 MIPEPQ99797 713 aa21.17■□□□□ 0.98
HOXA4-201ENST00000360046 CAPN10Q9HC96 672 aa21.17■□□□□ 0.98
HOXA4-201ENST00000360046 DYRK1BQ9Y463 629 aa21.17■□□□□ 0.98
HOXA4-201ENST00000360046 KCNE2Q9Y6J6 123 aa21.17■□□□□ 0.98
HOXA4-201ENST00000360046 ADAMTS9Q9P2N4 1935 aa21.17■□□□□ 0.98
HOXA4-201ENST00000360046 PCM1Q15154 2024 aa21.17■□□□□ 0.98
HOXA4-201ENST00000360046 MATN2O00339 956 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 HDAC3O15379 428 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 SKAP2O75563 359 aaPredicted RBP21.16■□□□□ 0.98
HOXA4-201ENST00000360046 SHMT2P34897 504 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 PRAMEF13Q5VWM6 474 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 SEC16BQ96JE7 1060 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 PPP1R36Q96LQ0 422 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 SIKE1Q9BRV8 207 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 NTMT1Q9BV86 223 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 ACAT2Q9BWD1 397 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 TMEM120AQ9BXJ8 343 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 GAREM1Q9H706 876 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 VTI1BQ9UEU0 232 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 GMEB2Q9UKD1 530 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 CABIN1Q9Y6J0 2220 aa21.16■□□□□ 0.98
HOXA4-201ENST00000360046 E7EQ34 232 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 CLDN9O95484 217 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 FGF4P08620 206 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 EBLN1P0CF75 366 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 SERPINB3P29508 390 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 RXRGP48443 463 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 ARFIP2P53365 341 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 HHEXQ03014 270 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 KANK2Q63ZY3 851 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 MAVSQ7Z434 540 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 AMIGO1Q86WK6 493 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 CACNA2D3Q8IZS8 1091 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 OR4E2Q8NGC2 313 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 NUSAP1Q9BXS6 441 aaKnown RBP21.15■□□□□ 0.98
HOXA4-201ENST00000360046 NUF2Q9BZD4 464 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 SRMSQ9H3Y6 488 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 TAC3Q9UHF0 121 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 TIMM22Q9Y584 194 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 PCDHGA5Q9Y5G8 931 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 ARHGAP33O14559 1287 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 CLGNO14967 610 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 SYPP08247 313 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 HGFP14210 728 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 NPPBP16860 134 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 GNAZP19086 355 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 MAZP56270 477 aaKnown RBP21.15■□□□□ 0.98
HOXA4-201ENST00000360046 IRF8Q02556 426 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 CHIT1Q13231 466 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 BIRC2Q13490 618 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 SHBQ15464 509 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 ZNF423Q2M1K9 1284 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 XKR6Q5GH73 641 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 VWA5B1Q5TIE3 1220 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 LAIR1Q6GTX8 287 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 IL27RAQ6UWB1 636 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 CCDC197Q8NCU1 140 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 METTL6Q8TCB7 284 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 C10orf82Q8WW14 230 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 ZFPM2Q8WW38 1151 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 ATOH1Q92858 354 aaPredicted RBP21.15■□□□□ 0.98
HOXA4-201ENST00000360046 NEIL2Q969S2 332 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 HAUS8Q9BT25 410 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 GTPBP2Q9BX10 602 aaKnown RBP21.15■□□□□ 0.98
HOXA4-201ENST00000360046 STN1Q9H668 368 aaKnown RBP21.15■□□□□ 0.98
HOXA4-201ENST00000360046 KCNK13Q9HB14 408 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 IL21RQ9HBE5 538 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 KCNK4Q9NYG8 393 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 GPRC5BQ9NZH0 403 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 RNF11Q9Y3C5 154 aa21.15■□□□□ 0.98
HOXA4-201ENST00000360046 KHNYNO15037 678 aaKnown RBP21.14■□□□□ 0.97
HOXA4-201ENST00000360046 DIAPH2O60879 1101 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 ENO1P06733 434 aaKnown RBP21.14■□□□□ 0.97
HOXA4-201ENST00000360046 CAPN1P07384 714 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 UROSP10746 265 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 ALOX15P16050 662 aaPredicted RBP21.14■□□□□ 0.97
HOXA4-201ENST00000360046 LCTLQ6UWM7 567 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 HMGCLL1Q8TB92 370 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 SETD7Q8WTS6 366 aaKnown RBP21.14■□□□□ 0.97
HOXA4-201ENST00000360046 TRPS1Q9UHF7 1281 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 SH2B3Q9UQQ2 575 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 ARL2BPQ9Y2Y0 163 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 DNAJC15Q9Y5T4 150 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 CSNK1G3Q9Y6M4 447 aa21.14■□□□□ 0.97
HOXA4-201ENST00000360046 A0A1B0GTQ1 180 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 ZNF195O14628 629 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 CHEK2O96017 543 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 JUNP05412 331 aaKnown RBP21.13■□□□□ 0.97
HOXA4-201ENST00000360046 PSMB5P28074 263 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 EPHA8P29322 1005 aaPredicted RBP21.13■□□□□ 0.97
HOXA4-201ENST00000360046 HMOX2P30519 316 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 TMPRSS11BQ86T26 416 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 RBM12BQ8IXT5 1001 aaKnown RBP21.13■□□□□ 0.97
HOXA4-201ENST00000360046 SLC25A45Q8N413 288 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 ANKS4BQ8N8V4 417 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 AVL9Q8NBF6 648 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 OR2I1PQ8NGU4 316 aa21.13■□□□□ 0.97
HOXA4-201ENST00000360046 TWIST2Q8WVJ9 160 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms