RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 CYB5D2Q8WUJ1 264 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 PYCR2Q96C36 320 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 TRPV4Q9HBA0 871 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 MED11Q9P086 117 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 CLCA3PQ9Y6N3 262 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 TLR4O00206 839 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 ITGA10O75578 1167 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 OR12D2P58182 307 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 SPIN3Q5JUX0 258 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 TMPRSS9Q7Z410 1059 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 TTYH2Q9BSA4 534 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 APOBEC3GQ9HC16 384 aaKnown RBP17.98■□□□□ 0.47
SHANK1-202ENST00000359082 LYARQ9NX58 379 aaKnown RBP17.98■□□□□ 0.47
SHANK1-202ENST00000359082 EIF1AYO14602 144 aaKnown RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 CSTF2P33240 577 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 BDKRB1P46663 353 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 HERVK_113P63132 956 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 DEFA5Q01523 94 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 MBOAT1Q6ZNC8 495 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 YIPF7Q8N8F6 280 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 CEP76Q8TAP6 659 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 ERVK-6Q9BXR3 956 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 CARS2Q9HA77 564 aaKnown RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 MLXQ9UH92 298 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 CFAP20Q9Y6A4 193 aaKnown RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 ENGP17813 658 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 S100A10P60903 97 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 DSTNP60981 165 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 IQCKQ8N0W5 287 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 BANPQ8N9N5 519 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 OR5M3Q8NGP4 307 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 RAB11FIP5Q9BXF6 653 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 SSU72Q9NP77 194 aaKnown RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 MATN2O00339 956 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 KLK1P06870 262 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 CD36P16671 472 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 MAGEA12P43365 314 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 DNASE1L3Q13609 305 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 TMCO6Q96DC7 493 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 EBF4Q9BQW3 602 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 FBXO9Q9UK97 447 aaPredicted RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 A8MU76 341 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 SLC2A2P11168 524 aaPredicted RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 RBM48Q5RL73 367 aaKnown RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 PNLDC1Q8NA58 520 aaKnown RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 GLB1L3Q8NCI6 653 aaPredicted RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 SLC22A17Q8WUG5 538 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 TMEM203Q969S6 136 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 RIOK2Q9BVS4 552 aaKnown RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 HYKKA2RU49 373 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 PI15O43692 258 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 OPN1SWP03999 348 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 BCHEP06276 602 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 CASRP41180 1078 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 MAGEA2P43356 314 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 PTP4A2Q12974 167 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 BLMHQ13867 455 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 FOXR2Q6PJQ5 311 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 KREMEN2Q8NCW0 462 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 HMGB4Q8WW32 186 aa17.97■□□□□ 0.47
SHANK1-202ENST00000359082 CNDP2Q96KP4 475 aaKnown RBP17.97■□□□□ 0.47
SHANK1-202ENST00000359082 ATF6P18850 670 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 OC90Q02509 493 aaPredicted RBP17.96■□□□□ 0.47
SHANK1-202ENST00000359082 ENPP2Q13822 863 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 PPP2R2DQ66LE6 453 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 LRRC20Q8TCA0 184 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 RIT1Q92963 219 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 TFB2MQ9H5Q4 396 aaKnown RBP17.96■□□□□ 0.47
SHANK1-202ENST00000359082 EIF2B3Q9NR50 452 aaKnown RBP17.96■□□□□ 0.47
SHANK1-202ENST00000359082 SERINC1Q9NRX5 453 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 LOC100509620A0A075B734 347 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 CPED1A4D0V7 1026 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 YJEFN3A6XGL0 299 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 CFIP05156 583 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 TACSTD2P09758 323 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 CDH1P12830 882 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 TRMT10BQ6PF06 316 aaKnown RBP17.96■□□□□ 0.47
SHANK1-202ENST00000359082 P2RX2Q9UBL9 471 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 MAFFQ9ULX9 164 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 POMPQ9Y244 141 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 A0A1W2PRQ8 180 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 MTX2O75431 263 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 USP2O75604 605 aaPredicted RBP17.96■□□□□ 0.47
SHANK1-202ENST00000359082 BPNT1O95861 308 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 UGT1A6P19224 532 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 UGT1A1P22309 533 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 UGT1A4P22310 534 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 WDR26Q9H7D7 661 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 GIN1Q9NXP7 522 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 A0A1W2PRU2 124 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 ITM2AO43736 263 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 THOC7Q6I9Y2 204 aaKnown RBP17.96■□□□□ 0.47
SHANK1-202ENST00000359082 ZNF598Q86UK7 904 aaKnown RBP17.96■□□□□ 0.47
SHANK1-202ENST00000359082 PCDH19Q8TAB3 1148 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 ADAM7Q9H2U9 754 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 SMURF1Q9HCE7 757 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 SLC7A4O43246 635 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 HK1P19367 917 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 ODF4Q2M2E3 257 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 INO80EQ8NBZ0 244 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms