RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 NLNQ9BYT8 704 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 IFT80Q9P2H3 777 aaPredicted RBP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 RUVBL1Q9Y265 456 aaKnown RBP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 ATG2BQ96BY7 2078 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 LOC100506127A0A0U1RQW1 187 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 SLC31A1O15431 190 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 ERN1O75460 977 aaKnown RBP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 PENKP01210 267 aaPredicted RBP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 MANFP55145 182 aaKnown RBP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 AP1S2P56377 157 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 RPS13P62277 151 aaKnown RBP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 MYBPC1Q00872 1141 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 C2orf27AQ580R0 203 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 IER5LQ5T953 404 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 UGT2A3Q6UWM9 527 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 SBSNQ6UWP8 590 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 KIAA2013Q8IYS2 634 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 KRT78Q8N1N4 520 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 SETD9Q8NE22 299 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 DDHD1Q8NEL9 900 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 ZSCAN5AQ9BUG6 496 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 CCDC177Q9NQR7 707 aaPredicted RBP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 RAD18Q9NS91 495 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 WDR70Q9NW82 654 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 CARNS1A5YM72 827 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 BCKDKO14874 412 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 RFC2P35250 354 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 ARSFP54793 590 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 CCNYL2Q5T2Q4 361 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 HSD11B1LQ7Z5J1 315 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 B4GALNT2Q8NHY0 566 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 BADQ92934 168 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 RBM4BQ9BQ04 359 aaKnown RBP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 RBM4Q9BWF3 364 aaKnown RBP13.85□□□□□ -0.19
SIRPA-202ENST00000358771 CWH43Q9H720 699 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 IL37Q9NZH6 218 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 DNAJB9Q9UBS3 223 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 TPRKBQ9Y3C4 175 aa13.85□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3DA0A087WVF3 549 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3IA0A087WXS9 549 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3EA0A087X179 549 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3KA0A087X1G2 549 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3FA6NER0 549 aaPredicted RBP13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3LB9A6J9 549 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 WASH3PC4AMC7 463 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 STK25O00506 426 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 SLC16A8O95907 504 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 ASLP04424 464 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3HP0C7X1 549 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 HSD17B1P14061 328 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 PRPS1L1P21108 318 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 HNMTP50135 292 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 ERVFC1P60507 584 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3GQ6DHY5 549 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3CQ6IPX1 549 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 LRRC70Q7Z2Q7 622 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TRIM48Q8IWZ4 208 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D3Q8IZP1 549 aaPredicted RBP13.84□□□□□ -0.19
SIRPA-202ENST00000358771 SMAD5Q99717 465 aaKnown RBP13.84□□□□□ -0.19
SIRPA-202ENST00000358771 HERC2P3Q9BVR0 1158 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 DLGAP4Q9Y2H0 992 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 LINC00854A0A1B0GVQ3 168 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 NFATC1O95644 943 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 ANGPTL1O95841 491 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 HSPB3Q12988 150 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 PCBP2Q15366 365 aaKnown RBP eCLIP13.84□□□□□ -0.193e-7■□□□□ 10.6
SIRPA-202ENST00000358771 MEP1AQ16819 746 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 GALNT7Q86SF2 657 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 VANGL1Q8TAA9 524 aaPredicted RBP13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TRMT2BQ96GJ1 504 aaKnown RBP13.84□□□□□ -0.19
SIRPA-202ENST00000358771 MYRFLQ96LU7 910 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 P2RY13Q9BPV8 354 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 INPP5KQ9BT40 448 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 RHBGQ9H310 441 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 AP3M1Q9Y2T2 418 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 DENRO43583 198 aaKnown RBP13.84□□□□□ -0.19
SIRPA-202ENST00000358771 VNN2O95498 520 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 RRM2P31350 389 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 FMO3P31513 532 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 ACVR1Q04771 509 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 EPS8Q12929 822 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 DOC2AQ14183 400 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 CMPK2Q5EBM0 449 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 OGFOD2Q6N063 350 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TNFAIP8L2Q6P589 184 aaPredicted RBP13.84□□□□□ -0.19
SIRPA-202ENST00000358771 HACD2Q6Y1H2 254 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 ADGRG5Q8IZF4 528 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 CLECL1Q8IZS7 167 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TBC1D19Q8N5T2 526 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 OR14C36Q8NHC7 312 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 STARD8Q92502 1023 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 GLYATL1Q969I3 302 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 ZNF641Q96N77 438 aaPredicted RBP13.84□□□□□ -0.19
SIRPA-202ENST00000358771 TOR3AQ9H497 397 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 ELOVL2Q9NXB9 296 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 PCDHGB5Q9Y5G0 923 aa13.84□□□□□ -0.19
SIRPA-202ENST00000358771 BRCA1P38398 1863 aaKnown RBP13.84□□□□□ -0.19
SIRPA-202ENST00000358771 A0A1B0GTW7 788 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms