RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PREX2Q70Z35 1606 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 C2orf92A0A1B0GVN3 265 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SRRM3A6NNA2 597 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PAPSS1O43252 624 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ONECUT3O60422 494 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ENTPD5O75356 428 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PAGE1O75459 146 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 F10P00742 488 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 CCL11P51671 97 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 NAGLUP54802 743 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SNRPFP62306 86 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PTPRCAPQ14761 206 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 KPNB1Q14974 876 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SLC39A4Q6P5W5 647 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 LAPTM4BQ86VI4 370 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 AMZ2Q86W34 360 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 NXPE1Q8N323 547 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 GPR137CQ8N3F9 429 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 INO80EQ8NBZ0 244 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 KCNN1Q92952 543 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 WNT8BQ93098 351 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PIP5K1AQ99755 562 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 VRK1Q99986 396 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 CHCHD6Q9BRQ6 235 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PCDH9Q9HC56 1237 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM9Q9P0T7 183 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 HPSEQ9Y251 543 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF451Q9Y4E5 1061 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DAPL1A0PJW8 107 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 CDC14CA4D256 554 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 NME6O75414 186 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 CHRNA1P02708 482 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 STOMP27105 288 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SSTR1P30872 391 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 TMBIM6P55061 237 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DLX2Q07687 328 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SCAPQ12770 1279 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 NTRK2Q16620 822 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DECR1Q16698 335 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ABHD17BQ5VST6 288 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 TMPRSS7Q7RTY8 843 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PIAS4Q8N2W9 510 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 GMLQ99445 158 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 TLR10Q9BXR5 811 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 RC3H2Q9HBD1 1191 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ZCCHC17Q9NP64 241 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 MIOSQ9NXC5 875 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 TAS2R14Q9NYV8 317 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ZFR2Q9UPR6 939 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 WNT10BO00744 389 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 NRP1O14786 923 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 MMP20O60882 483 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 MTX2O75431 263 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 LCKP06239 509 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 AKR1C4P17516 323 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 KHKP50053 298 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 GHRHRQ02643 423 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ITGB3BPQ13352 177 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 C12orf29Q8N999 325 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 OR4K2Q8NGD2 314 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 OR13C3Q8NGS6 347 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 OR5AK3PQ8NH89 298 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ZFP90Q8TF47 636 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 GLYATL2Q8WU03 294 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ASB15Q8WXK1 588 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 DPF1Q92782 380 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 SLC38A4Q969I6 547 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 GINS3Q9BRX5 216 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 SMOXQ9NWM0 555 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 NDUFAF4Q9P032 175 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 MYRFQ9Y2G1 1151 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 TESMINQ9Y4I5 508 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 PCDHB1Q9Y5F3 818 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ARHGEF5Q12774 1597 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 A0A1W2PRQ8 180 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 PLSCR5A0PG75 271 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 TTC24A2A3L6 582 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 KLRG2A4D1S0 409 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF860A6NHJ4 632 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 RPLP0P05388 317 aaKnown RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 THRBP10828 461 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 FOSL1P15407 271 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 TIMP2P16035 220 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 AZGP1P25311 298 aaKnown RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 TKTP29401 623 aaKnown RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 GRIA4P48058 902 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 CLCNKAP51800 687 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 SEC24CP53992 1094 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 GRK1Q15835 563 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 TREML2Q5T2D2 321 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 RAB12Q6IQ22 244 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 DNM1P34Q6PK57 102 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ANKRD23Q86SG2 305 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 CROCCP3Q8IVE0 287 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 OR6Q1Q8NGQ2 317 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 RPLP0P6Q8NHW5 317 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 PYDC1Q8WXC3 89 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 PIWIL1Q96J94 861 aaKnown RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ACTR6Q9GZN1 396 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms