RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 PTX3P26022 381 aaPredicted RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 SOAT1P35610 550 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 CHIT1Q13231 466 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 CLDN19Q8N6F1 224 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 RHEBL1Q8TAI7 183 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 PRR11Q96HE9 360 aaPredicted RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 ATG10Q9H0Y0 220 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 SLC12A4Q9UP95 1085 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 CFL2Q9Y281 166 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 HEMK1Q9Y5R4 338 aaPredicted RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 A0A0J9YVX5 310 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 A6NCN8 305 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 AGPSO00116 658 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 NDUFS4O43181 175 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 DIAPH2O60879 1101 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 C2P06681 752 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 CHI3L1P36222 383 aaPredicted RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 CASP2P42575 452 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 ASMTP46597 345 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 CTSCP53634 463 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 CLNS1AP54105 237 aaKnown RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 IRX1P78414 480 aaPredicted RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 TSNQ15631 228 aaKnown RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 LSM12Q3MHD2 195 aaKnown RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 C6orf15Q6UXA7 325 aaPredicted RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 CYP4X1Q8N118 509 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 TADA1Q96BN2 335 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 RMDN2Q96LZ7 410 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 ZFYVE21Q9BQ24 234 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 CD244Q9BZW8 370 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 I6L893 689 aaPredicted RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 AURKAO14965 403 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 SRPX2O60687 465 aaPredicted RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 DCTN3O75935 186 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 CKMT1AP12532 417 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 TRIM23P36406 574 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 ARCN1P48444 511 aaKnown RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 LIMK1P53667 647 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 UCNP55089 124 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 GBX1Q14549 363 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 EFTUD2Q15029 972 aaKnown RBP eCLIP8.91□□□□□ -0.982e-8■■■■□ 24.4
UPF2-202ENST00000357604 TMEM35AQ53FP2 167 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 NUDT13Q86X67 352 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 CSNK1A1LQ8N752 337 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 OR13J1Q8NGT2 312 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 TRPC4APQ8TEL6 797 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 TM9SF4Q92544 642 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 NXNL1Q96CM4 212 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 TUBGCP3Q96CW5 907 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 MAGEB18Q96M61 343 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 TMEM109Q9BVC6 243 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 MS4A12Q9NXJ0 267 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 LGALS13Q9UHV8 139 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 TMEM120BA0PK00 339 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 CEACAM1P13688 526 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 PKLRP30613 574 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 SLC1A6P48664 564 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 ARSDP51689 593 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 OR1D5P58170 312 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 ZNF33BQ06732 778 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 CYP4F3Q08477 520 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 GNA13Q14344 377 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 NR6A1Q15406 480 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 CCNYL2Q5T2Q4 361 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 GLIS1Q8NBF1 620 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 PDLIM5Q96HC4 596 aaKnown RBP8.9□□□□□ -0.98
UPF2-202ENST00000357604 BMFQ96LC9 184 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 PKP4Q99569 1192 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 ZDHHC18Q9NUE0 388 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 PCDHGB3Q9Y5G1 929 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 MTCL1Q9Y4B5 1905 aaKnown RBP8.9□□□□□ -0.98
UPF2-202ENST00000357604 TRBV5-4A0A0C4DH59 114 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 AGRPO00253 132 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 TAS2R39P59534 338 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 GALNTL6Q49A17 601 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 ANXA8L1Q5VT79 327 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 SPESP1Q6UW49 350 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 ABRAXAS1Q6UWZ7 409 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 BOCQ9BWV1 1114 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 UNKQ9C0B0 810 aaKnown RBP8.9□□□□□ -0.98
UPF2-202ENST00000357604 IPPKQ9H8X2 491 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 SEMA3GQ9NS98 782 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 OGFRQ9NZT2 677 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 OR5K3A6NET4 321 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 BRINP1O60477 761 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 NPHS1O60500 1241 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 CD160O95971 181 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 CAPZBP47756 277 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 HSPA7P48741 367 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 ALDH9A1P49189 494 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 VSX2P58304 361 aaPredicted RBP8.9□□□□□ -0.98
UPF2-202ENST00000357604 LCP2Q13094 533 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 SLBPQ14493 270 aaKnown RBP eCLIP8.9□□□□□ -0.98
UPF2-202ENST00000357604 ZDHHC24Q6UX98 284 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 FAM98AQ8NCA5 519 aaKnown RBP8.9□□□□□ -0.98
UPF2-202ENST00000357604 ZCCHC10Q8TBK6 192 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 DCAKDQ8WVC6 231 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 COX14Q96I36 57 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 PWWP2AQ96N64 755 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 NDEL1Q9GZM8 345 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms