RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TSTA3Q13630 321 aaPredicted RBP17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 KRT33BQ14525 404 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 OR52E1Q8NGJ3 308 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 XKR8Q9H6D3 395 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 ACTR8Q9H981 624 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 LNPEPQ9UIQ6 1025 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 ICKQ9UPZ9 632 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 KCNE1BA0A087WTH5 132 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 A0A1B0GVT2 93 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 A0A1W2PPV9 198 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 E7EQ34 232 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 HNRNPCL1O60812 293 aaKnown RBP17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 WFS1O76024 890 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 CLDN9O95484 217 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 CHEK2O96017 543 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 CD22P20273 847 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 AVPR2P30518 371 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 PKLRP30613 574 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 HSD17B2P37059 387 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 HTR6P50406 440 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 PCDH1Q08174 1060 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 L3MBTL4Q8NA19 623 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 METTL6Q8TCB7 284 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 NEIL2Q969S2 332 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 KIR3DX1Q9H7L2 352 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 CCDC177Q9NQR7 707 aaPredicted RBP17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 RRP15Q9Y3B9 282 aaKnown RBP17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 COLEC10Q9Y6Z7 277 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 SNRNP200O75643 2136 aaKnown RBP17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 ANKRD65E5RJM6 399 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 CBX6O95503 412 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 LINC00032P0C843 101 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 NCF2P19878 526 aaPredicted RBP17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 RAB28P51157 221 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 C21orf59P57076 290 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 NCALDP61601 193 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 BNC1Q01954 994 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 CHIT1Q13231 466 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 UBAP2LQ14157 1087 aaKnown RBP17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 GGTA1PQ4G0N0 100 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 GLIPR1L2Q4G1C9 344 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 SCIMPQ6UWF3 145 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 NAGSQ8N159 534 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 CPSF7Q8N684 471 aaKnown RBP17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 JPH3Q8WXH2 748 aaPredicted RBP17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 CXorf40BQ96DE9 158 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 PTCD3Q96EY7 689 aaKnown RBP17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 ZNF385DQ9H6B1 395 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 PFDN4Q9NQP4 134 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 MRGBPQ9NV56 204 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 ARL8BQ9NVJ2 186 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 PILRBQ9UKJ0 227 aa17.55■□□□□ 0.4
SMARCD3-202ENST00000356800 A0A1B0GTW7 788 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 PRR5-ARHGAP8B1AHC4 643 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 FFAR3O14843 346 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 SLC22A2O15244 555 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 GPR42O15529 346 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 VPS4BO75351 444 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 NDUFS1P28331 727 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 ADSLP30566 484 aaPredicted RBP17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 CORO7P57737 925 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 YBX1P67809 324 aaKnown RBP17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 ACTN3Q08043 901 aaPredicted RBP17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 NXNQ6DKJ4 435 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 SLCO4C1Q6ZQN7 724 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 CHSY3Q70JA7 882 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 LARP4Q71RC2 724 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 MYLK4Q86YV6 388 aaPredicted RBP17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 TREML1Q86YW5 311 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 DDIASQ8IXT1 998 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 OR2L8Q8NGY9 312 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 HMGCLL1Q8TB92 370 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 LMX1AQ8TE12 382 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 SETD7Q8WTS6 366 aaKnown RBP17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 SMPDL3AQ92484 453 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 NSL1Q96IY1 281 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 ZC3H10Q96K80 434 aaKnown RBP17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 SLC40A1Q9NP59 571 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 GPRC5BQ9NZH0 403 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 KCNE2Q9Y6J6 123 aa17.54■□□□□ 0.4
SMARCD3-202ENST00000356800 ATP6AP2A0A1C7CYW4 349 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 ATP6AP2O75787 350 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 SP9P0CG40 484 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 XRCC1P18887 633 aaPredicted RBP17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 GNAZP19086 355 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 CALB2P22676 271 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 CCND1P24385 295 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 PSMB5P28074 263 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 HMOX2P30519 316 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 CTSKP43235 329 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 UBE2IP63279 158 aaKnown RBP17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 IRF8Q02556 426 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 DOC2AQ14183 400 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 E2F2Q14209 437 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 ELOCQ15369 112 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 CPSF6Q16630 551 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 KIF19Q2TAC6 998 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 ZNF528Q3MIS6 628 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 XKR7Q5GH72 579 aa17.53■□□□□ 0.4
SMARCD3-202ENST00000356800 XKR6Q5GH73 641 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms