RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 CELF5Q8N6W0 485 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 OR4K17Q8NGC6 315 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 KLHL6Q8WZ60 621 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ACTL8Q9H568 366 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 SUV39H2Q9H5I1 410 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TRIM36Q9NQ86 728 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ABCB8Q9NUT2 735 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 VPS29Q9UBQ0 182 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 IQCF5A8MTL0 148 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 FAM155BO75949 473 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ADH5P11766 374 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ELNP15502 786 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 CSKP41240 450 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 PLA2G16P53816 162 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 FPGSQ05932 587 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TUBA3CQ13748 450 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 RAB39AQ14964 217 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 UBXN2BQ14CS0 331 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 GRIK5Q16478 980 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 EML3Q32P44 896 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 LIN52Q52LA3 116 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 HSDL2Q6YN16 418 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SPAG16Q8N0X2 631 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 NXPE1Q8N323 547 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ZNF781Q8N8C0 355 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ZNF565Q8N9K5 539 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TMIEQ8NEW7 156 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 OR6K6Q8NGW6 343 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 CD99L2Q8TCZ2 262 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ING5Q8WYH8 240 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SMPDL3BQ92485 455 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 NKD1Q969G9 470 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TMEM209Q96SK2 561 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 CXorf21Q9HAI6 301 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TRPV4Q9HBA0 871 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SLC2A4RGQ9NR83 387 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TDP1Q9NUW8 608 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TRNAU1APQ9NX07 287 aaKnown RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 RDH8Q9NYR8 311 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 DNAJB4Q9UDY4 337 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 CYTH4Q9UIA0 394 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 NR2E1Q9Y466 385 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 PIGBOS1A0A0B4J2F0 54 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 NEMP2A6NFY4 417 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 AGPSO00116 658 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SLC31A1O15431 190 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 CYP11A1P05108 521 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 KLK3P07288 261 aaPredicted RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 NELFEP18615 380 aaKnown RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 EDNRAP25101 427 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 PBX1P40424 430 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 GLP1RP43220 463 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 PRKCDQ05655 676 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 DPYSL2Q16555 572 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ALG10Q5BKT4 473 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 CRB2Q5IJ48 1285 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 PPM1JQ5JR12 505 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 FAM43BQ6ZT52 329 aaPredicted RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 NEDD4LQ96PU5 975 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 LENG8Q96PV6 779 aaPredicted RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 SLC35A5Q9BS91 424 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 B3GNT4Q9C0J1 378 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ADAM7Q9H2U9 754 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SMURF1Q9HCE7 757 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TMEM5Q9Y2B1 443 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ALG5Q9Y673 324 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 HYKKA2RU49 373 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 EFCAB9A8MZ26 197 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 MUSKO15146 869 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 CA12O43570 354 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 MT-CYBP00156 380 aaPredicted RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 IFNA7P01567 189 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ENDOUP21128 410 aaKnown RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 CSTF2P33240 577 aaKnown RBP eCLIP6.32□□□□□ -1.4
UPF2-201ENST00000356352 SLC6A9P48067 706 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SEPHS1P49903 392 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ARPC4P59998 168 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ACTR1AP61163 376 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SLBPQ14493 270 aaKnown RBP eCLIP6.32□□□□□ -1.4
UPF2-201ENST00000356352 ECM1Q16610 540 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TIGD6Q17RP2 521 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 WDR45BQ5MNZ6 344 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SPRYD7Q5W111 196 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ENPP7Q6UWV6 458 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 MFSD3Q96ES6 412 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ADAD1Q96M93 576 aaKnown RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 OSBPL2Q9H1P3 480 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 SLC32A1Q9H598 525 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 MARCH7Q9H992 704 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 CARS2Q9HA77 564 aaKnown RBP6.32□□□□□ -1.4
UPF2-201ENST00000356352 PTTG2Q9NZH5 202 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 CIDEBQ9UHD4 219 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TMPRSS11EQ9UL52 423 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 GLTPD2A6NH11 291 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 DISC1C4P0D8 188 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ZNF878C9JN71 531 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 ADH1BP00325 375 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 C8BP07358 591 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 TM4SF1P30408 202 aa6.32□□□□□ -1.4
UPF2-201ENST00000356352 MAGEA2P43356 314 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms