RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 SLC9B1P1A6NJY1 282 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 TK2O00142 265 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 RGS16O15492 202 aaPredicted RBP21.37■■□□□ 1.01
SHMT1-203ENST00000354098 RBP1P09455 135 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 SBK3P0C264 359 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 ST6GAL1P15907 406 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 RPA3P35244 121 aaPredicted RBP21.37■■□□□ 1.01
SHMT1-203ENST00000354098 SLC18A2Q05940 514 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 TRA2AQ13595 282 aaKnown RBP eCLIP21.37■■□□□ 1.01
SHMT1-203ENST00000354098 SLC5A12Q1EHB4 618 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 KIAA1614Q5VZ46 1190 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 OR56A3Q8NH54 315 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 CCDC177Q9NQR7 707 aaPredicted RBP21.37■■□□□ 1.01
SHMT1-203ENST00000354098 C1GALT1Q9NS00 363 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 SEMA5BQ9P283 1151 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 DCDC2Q9UHG0 476 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 PCDHB11Q9Y5F2 797 aa21.37■■□□□ 1.01
SHMT1-203ENST00000354098 PMS2P1A4D2B8 440 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 TOX3O15405 576 aaPredicted RBP21.36■■□□□ 1.01
SHMT1-203ENST00000354098 ANKRD34CP0C6C1 535 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 CREB1P16220 341 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 GDF5P43026 501 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 HNMTP50135 292 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 PTCHD3Q3KNS1 767 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 THEMIS2Q5TEJ8 643 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 PDPRQ8NCN5 879 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 OR2L3Q8NG85 312 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 KLHL6Q8WZ60 621 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 TRAPPC9Q96Q05 1148 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 TMEM79Q9BSE2 394 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 SCNM1Q9BWG6 230 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 SGPP1Q9BX95 441 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 C12orf65Q9H3J6 166 aaKnown RBP21.36■■□□□ 1.01
SHMT1-203ENST00000354098 ZNF768Q9H5H4 540 aaKnown RBP21.36■■□□□ 1.01
SHMT1-203ENST00000354098 NUDT4Q9NZJ9 180 aa21.36■■□□□ 1.01
SHMT1-203ENST00000354098 PTBP2Q9UKA9 531 aaKnown RBP21.36■■□□□ 1.01
SHMT1-203ENST00000354098 A0A0J9YY10 115 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 CCDC189A1A4V9 331 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 MAP2K7O14733 419 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 HGFP14210 728 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 SULT1C3Q6IMI6 304 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 LCA5Q86VQ0 697 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 LIN37Q96GY3 246 aaPredicted RBP21.35■■□□□ 1.01
SHMT1-203ENST00000354098 OR4K3Q96R72 315 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 MRPL57Q9BQC6 102 aaKnown RBP21.35■■□□□ 1.01
SHMT1-203ENST00000354098 STRADBQ9C0K7 418 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 MRPL46Q9H2W6 279 aaKnown RBP21.35■■□□□ 1.01
SHMT1-203ENST00000354098 EMCNQ9ULC0 261 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 SH2B3Q9UQQ2 575 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 ASB1Q9Y576 335 aa21.35■■□□□ 1.01
SHMT1-203ENST00000354098 SYCE1LA8MT33 242 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 TMX2-CTNND1H3BSU7 103 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 GSTA1P08263 222 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 ADRB1P08588 477 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 NPPBP16860 134 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 MAGP20916 626 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 ZIC1Q15915 447 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 CDKL4Q5MAI5 379 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 PRAMEF13Q5VWM6 474 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 CAPN13Q6MZZ7 669 aaPredicted RBP21.34■■□□□ 1.01
SHMT1-203ENST00000354098 HDXQ7Z353 690 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 SLC41A2Q96JW4 573 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 OCIAD1Q9NX40 245 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 WWOXQ9NZC7 414 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 SLC22A14Q9Y267 594 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 TARM1B6A8C7 271 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 AGPSO00116 658 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 COPEO14579 308 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 HGSO14964 777 aaPredicted RBP21.34■■□□□ 1.01
SHMT1-203ENST00000354098 GLRA3O75311 464 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 ZBTB11O95625 1053 aaPredicted RBP21.34■■□□□ 1.01
SHMT1-203ENST00000354098 S100BP04271 92 aaPredicted RBP21.34■■□□□ 1.01
SHMT1-203ENST00000354098 CCL4P13236 92 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 NELFEP18615 380 aaKnown RBP21.34■■□□□ 1.01
SHMT1-203ENST00000354098 CSTF2P33240 577 aaKnown RBP eCLIP21.34■■□□□ 1.01
SHMT1-203ENST00000354098 CRHR1P34998 444 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 GGT5P36269 586 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 SLC6A12P48065 614 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 CCT5P48643 541 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 HSPA7P48741 367 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 AGTR2P50052 363 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 PRDX1Q06830 199 aaKnown RBP21.34■■□□□ 1.01
SHMT1-203ENST00000354098 KCNAB1Q14722 419 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 PFKFB4Q16877 469 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 TNFAIP8L3Q5GJ75 292 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 ICE2Q659A1 982 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 RAB11FIP2Q7L804 512 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 CROCCP2Q86T23 111 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 BANPQ8N9N5 519 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 GRAMD1AQ96CP6 724 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 PGM2Q96G03 612 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 LOXL2Q9Y4K0 774 aa21.34■■□□□ 1.01
SHMT1-203ENST00000354098 IGKV1-8A0A0C4DH67 115 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 KLK8O60259 260 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 NRP2O60462 931 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 SPAG7O75391 227 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 GFAPP14136 432 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 GRIA3P42263 894 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 SH3BP2P78314 561 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 THOC6Q86W42 341 aaKnown RBP21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms