RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 DDX39BQ13838 428 aaKnown RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 CLCA4Q14CN2 919 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 IMPG1Q17R60 797 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 TRMT5Q32P41 509 aaKnown RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 TIGD2Q4W5G0 525 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 PTCRAQ6ISU1 281 aaPredicted RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 SLCO4C1Q6ZQN7 724 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 RNF165Q6ZSG1 346 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 TMPRSS11BQ86T26 416 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 KBTBD6Q86V97 674 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 ENDOVQ8N8Q3 282 aaKnown RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 ZNF740Q8NDX6 193 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 ATL1Q8WXF7 558 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 HLA-CQ95604 372 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 PDXPQ96GD0 296 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 EGLN2Q96KS0 407 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 PPP3R2Q96LZ3 170 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 ACAT2Q9BWD1 397 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 SGPP1Q9BX95 441 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 PCDHAC1Q9H158 963 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 SLC2A4RGQ9NR83 387 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 SCML1Q9UN30 329 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 NCKAP1Q9Y2A7 1128 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 NDUFAF1Q9Y375 327 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 PRR19A6NJB7 356 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 OR52A4PA6NMU1 304 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 SLC28A1O00337 649 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 MAP3K7O43318 606 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 EML2O95834 649 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 B3GALT4O96024 378 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 PNLIPRP1P54315 467 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 PLIN5Q00G26 463 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 FZD5Q13467 585 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 FBXO43Q4G163 708 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 CAPRIN2Q6IMN6 1127 aaKnown RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 SLC2A7Q6PXP3 512 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 LIX1Q8N485 282 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 CCL4L1Q8NHW4 92 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 PYDC1Q8WXC3 89 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 GUCD1Q96NT3 240 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 GPATCH1Q9BRR8 931 aaKnown RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 PFDN4Q9NQP4 134 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 ADA2Q9NZK5 511 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 NOP53Q9NZM5 478 aaKnown RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 SCHIP1Q9P0W5 487 aaPredicted RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 PRPF19Q9UMS4 504 aaKnown RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 SNX6Q9UNH7 406 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 GPSM3Q9Y4H4 160 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 PCM1Q15154 2024 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 A0A1W2PP18 115 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 A0A1W2PPC1 479 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 KRBA1A5PL33 1030 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 AXIN1O15169 862 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 CIB2O75838 187 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 BCKDHAP12694 445 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 GLULP15104 373 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 GNAZP19086 355 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 PLOD1Q02809 727 aaPredicted RBP13.13□□□□□ -0.31
CDC42-202ENST00000344548 GRIK2Q13002 908 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 RPA4Q13156 261 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 USP39Q53GS9 565 aaKnown RBP13.13□□□□□ -0.31
CDC42-202ENST00000344548 LIPJQ5W064 366 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 ANO7Q6IWH7 933 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 UNC5DQ6UXZ4 953 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 ZFAND4Q86XD8 727 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 OR5K2Q8NHB8 316 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 NRG4Q8WWG1 115 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 OR1E3Q8WZA6 343 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 C6orf106Q9H6K1 298 aaPredicted RBP13.13□□□□□ -0.31
CDC42-202ENST00000344548 PRDM8Q9NQV8 689 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 ITM2CQ9NQX7 267 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 C1orf109Q9NX04 203 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 ZIM2Q9NZV7 527 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 KANSL1LA0AUZ9 987 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 MAGEB17A8MXT2 336 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 IFRD1O00458 451 aaPredicted RBP13.13□□□□□ -0.31
CDC42-202ENST00000344548 PSMB5P28074 263 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 SLC7A2P52569 658 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 SESN3P58005 492 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 CAPN13Q6MZZ7 669 aaPredicted RBP13.13□□□□□ -0.31
CDC42-202ENST00000344548 GCNT7Q6ZNI0 430 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 FAM160A2Q8N612 972 aaPredicted RBP13.13□□□□□ -0.31
CDC42-202ENST00000344548 LINC01555Q8NAE3 123 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 OR7G3Q8NG95 312 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 RLN3Q8WXF3 142 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 TSACCQ96A04 125 aaPredicted RBP13.13□□□□□ -0.31
CDC42-202ENST00000344548 C12orf66Q96MD2 445 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 DCLRE1BQ9H816 532 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 MRGBPQ9NV56 204 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 CROTQ9UKG9 612 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 KCNE2Q9Y6J6 123 aa13.13□□□□□ -0.31
CDC42-202ENST00000344548 C10orf142B7Z368 130 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 NME4O00746 187 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 ACOT8O14734 319 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 ANGPT2O15123 496 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 DNAJA2O60884 412 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 SLC6A2P23975 617 aa13.12□□□□□ -0.31
CDC42-202ENST00000344548 AK4P27144 223 aaPredicted RBP13.12□□□□□ -0.31
CDC42-202ENST00000344548 KCNK10P57789 538 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms