RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SLC38A7Q9NVC3 462 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SMOXQ9NWM0 555 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF432O94892 652 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ACSM4P0C7M7 580 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ALDH3B1P43353 468 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 BAG6P46379 1132 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NPY2RP49146 381 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FXR1P51114 621 aaKnown RBP eCLIP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CDH15P55291 814 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RPS20P60866 119 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 DALRD3Q5D0E6 543 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KCTD12Q96CX2 325 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SERINC2Q96SA4 455 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GMPPBQ9Y5P6 360 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TRAV6A0A075B6T7 132 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RNASEH1O60930 286 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 IL3P08700 152 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ETS1P14921 441 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SNAPC2Q13487 334 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TFDP1Q14186 410 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FASTKQ14296 549 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 C5orf46Q6UWT4 87 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SIRT2Q8IXJ6 389 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 LINC00471Q8N535 108 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KCNRGQ8N5I3 272 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MCPH1Q8NEM0 835 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PIGBQ92521 554 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GTF2H4Q92759 462 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ADI1Q9BV57 179 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TPPP3Q9BW30 176 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TIGARQ9NQ88 270 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HSPBP1Q9NZL4 362 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KANSL3Q9P2N6 904 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 DHRS7Q9Y394 339 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NESP48681 1621 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NCR1O76036 304 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NR3C1P04150 777 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HEXAP06865 529 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 QDPRP09417 244 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 DPP6P42658 865 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ARSEP51690 589 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OSTNP61366 133 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 LMBR1LQ6UX01 489 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PXKQ7Z7A4 578 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TASP1Q9H6P5 420 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CDH10Q9Y6N8 788 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 USP17L10C9JJH3 530 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OPLAHO14841 1288 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 LATO43561 262 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RRASP10301 218 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CDK2P24941 298 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KLRC3Q07444 240 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SEMA5AQ13591 1074 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CHRNA2Q15822 529 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ADIPOR1Q96A54 375 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TBL1YQ9BQ87 522 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 YIPF4Q9BSR8 244 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 LIPT1Q9Y234 373 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KLK4Q9Y5K2 254 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ARHGAP5Q13017 1502 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 E7ESA3 106 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 K7ERU9 68 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 AKR7A2O43488 359 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SEC14L2O76054 403 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ITGAMP11215 1152 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 BAATQ14032 418 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 THEM4Q5T1C6 240 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CHST3Q7LGC8 479 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 LRRC70Q7Z2Q7 622 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 BAP1Q92560 729 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GCNAQ96QF7 691 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OR52A5Q9H2C5 316 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 POLMQ9NP87 494 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 DNAJC5BQ9UF47 199 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 STK25O00506 426 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ADH1CP00326 375 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RLN1P04808 185 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HUNKP57058 714 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PPP3R1P63098 170 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CYP27A1Q02318 531 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CSTF1Q05048 431 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RPL22L1Q6P5R6 122 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RPTNQ6XPR3 784 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 COMMD1Q8N668 190 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GAL3ST2Q9H3Q3 398 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SOHLH2Q9NX45 425 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 KLHL28Q9NXS3 571 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 INTS6Q9UL03 887 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 POMPQ9Y244 141 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CSADQ9Y600 493 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NEDD8-MDP1E9PL57 170 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SLC22A5O76082 557 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 FHP07954 510 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NR2F2P24468 414 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HEATR6Q6AI08 1181 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ALKBH2Q6NS38 261 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PRSS55Q6UWB4 352 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 OR5H6Q8NGV6 325 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CMBLQ96DG6 245 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 WWTR1Q9GZV5 400 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms