RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 KIAA0513O60268 411 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 KPNA6O60684 536 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ADAM11O75078 769 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF623O75123 536 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 SLC43A1O75387 559 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ARSAP15289 507 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 GOT1P17174 413 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 FPR1P21462 350 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 FSHRP23945 695 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 MAOBP27338 520 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 MAP2K3P46734 347 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ALDH9A1P49189 494 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 DAB2P98082 770 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 GRB7Q14451 532 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF460Q14592 562 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 HSD17B12Q53GQ0 312 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 GNASQ5JWF2 1037 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PM20D1Q6GTS8 502 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 LAMTOR1Q6IAA8 161 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 TMEM81Q6P7N7 255 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RRM2BQ7LG56 351 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 LIMS2Q7Z4I7 341 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 LUZP2Q86TE4 346 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 DPP9Q86TI2 863 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 TDHQ8IZJ6 230 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 GHDCQ8N2G8 530 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 EFHBQ8N7U6 833 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF366Q8N895 744 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF548Q8NEK5 533 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 FRS2Q8WU20 508 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RBPMSQ93062 196 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 FAM149B1Q96BN6 582 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PHF21BQ96EK2 531 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 Q96MT0 163 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 TMEM209Q96SK2 561 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 CHCHD6Q9BRQ6 235 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 C11orf84Q9BUA3 381 aaPredicted RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 BEX2Q9BXY8 128 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 COA1Q9GZY4 146 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 FOLH1BQ9HBA9 442 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 IL1RAPQ9NPH3 570 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PCDHB16Q9NRJ7 776 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 INTS7Q9NVH2 962 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 LYARQ9NX58 379 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 EMC3Q9P0I2 261 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 PSORS1C1Q9UIG5 152 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 KIF25Q9UIL4 384 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 FEM1BQ9UK73 627 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 ADAM30Q9UKF2 790 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 TSPAN16Q9UKR8 245 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 SAMD4AQ9UPU9 718 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 BAIAP2Q9UQB8 552 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 AAR2Q9Y312 384 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 TNPO3Q9Y5L0 923 aaKnown RBP7.93□□□□□ -1.14
ATG4A-201ENST00000343524 RNF215Q9Y6U7 377 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 U3KQV3 271 aa7.93□□□□□ -1.14
ATG4A-201ENST00000343524 VCANP13611 3396 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 CLCA1A8K7I4 914 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 FAM220BPB1ANY3 271 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 PRSS44E7EML9 344 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 GPR37O15354 613 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 PTP4A3O75365 173 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 GRAP2O75791 330 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 LDOC1O95751 146 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 HLA-DQB1P01920 261 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 RAF1P04049 648 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ICAM1P05362 532 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 HMBSP08397 361 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 POU3F3P20264 500 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 PTBP1P26599 531 aaKnown RBP eCLIP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 WEE1P30291 646 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 DNAJA1P31689 397 aaKnown RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 SLC1A2P43004 574 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 MAGEA2P43356 314 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 AIF1P55008 147 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 GPR85P60893 370 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ERVK-21P61565 698 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 LCP2Q13094 533 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 SIM2Q14190 667 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 UNC50Q53HI1 259 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 RAB6CQ53S08 254 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ALFQ53S48 1182 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 RUNDC3AQ59EK9 446 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 IER5Q5VY09 327 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 TRIQKQ629K1 86 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 CPZQ66K79 652 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 GPR139Q6DWJ6 353 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ZNF549Q6P9A3 640 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ENPP6Q6UWR7 440 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 FAM131AQ6UXB0 335 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 GPR149Q86SP6 731 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 GALNT10Q86SR1 603 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ABI1Q8IZP0 508 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 DUSP18Q8NEJ0 188 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 MAFAQ8NHW3 353 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 FANK1Q8TC84 345 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 SYTL5Q8TDW5 730 aaPredicted RBP7.92□□□□□ -1.14
ATG4A-201ENST00000343524 RNF139Q8WU17 664 aa7.92□□□□□ -1.14
ATG4A-201ENST00000343524 ST8SIA4Q92187 359 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms