RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 HNF1BP35680 557 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACTBP60709 375 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACTG1P63261 375 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MYLK3Q32MK0 819 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 RNF149Q8NC42 400 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 HASPINQ8TF76 798 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 CHTF18Q8WVB6 975 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 HAS2Q92819 552 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 RERGQ96A58 199 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 SLC5A7Q9GZV3 580 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 XIRP1Q702N8 1843 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 DAPL1A0PJW8 107 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 NDUFB10O96000 172 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MYBP10242 640 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 CD247P20963 164 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MCAMP43121 646 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SLC26A5P58743 744 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TAS2R31P59538 309 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACTA2P62736 377 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACTG2P63267 376 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACTC1P68032 377 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACTA1P68133 377 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TMEM41BQ5BJD5 291 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MIIPQ5JXC2 388 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TMEM69Q5SWH9 247 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 LRRC66Q68CR7 880 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 FIP1L1Q6UN15 594 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 ENDOVQ8N8Q3 282 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 SMARCD2Q92925 531 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 COQ8BQ96D53 544 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ZNF670Q9BS34 389 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 BRINP2Q9C0B6 783 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 C1orf21Q9H246 121 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TCEAL2Q9H3H9 227 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 PIDD1Q9HB75 910 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 KCNJ16Q9NPI9 418 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 AGPAT3Q9NRZ7 376 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SRRDQ9UH36 339 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 IKZF2Q9UKS7 526 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ADAMTS12P58397 1594 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 C4AP0C0L4 1744 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 C4BP0C0L5 1744 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TEX13CA0A0J9YWL9 993 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 HNF1AP20823 631 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ETV3P41162 512 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ZNF792Q3KQV3 632 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CMPK2Q5EBM0 449 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SLC39A4Q6P5W5 647 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 RFWD3Q6PCD5 774 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ZNF571Q7Z3V5 609 aaPredicted RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 PXKQ7Z7A4 578 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 GPR180Q86V85 440 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SIMC1Q8NDZ2 872 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MOAP1Q96BY2 351 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 RDH12Q96NR8 316 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SLC19A3Q9BZV2 496 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 LRRC19Q9H756 370 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 NANSQ9NR45 359 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ENAMQ9NRM1 1142 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SNX15Q9NRS6 342 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SLAIN2Q9P270 581 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MED31Q9Y3C7 131 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ZNF521Q96K83 1311 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CCDC163A0A0D9SF12 145 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 HHLA1C9JL84 531 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 NKRFO15226 690 aaKnown RBP eCLIP6.04□□□□□ -1.44
VCAN-203ENST00000343200 ATP6AP2O75787 350 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 H2AFB2P0C5Z0 115 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CTHP32929 405 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 IGFALSP35858 605 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 GBE1Q04446 702 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 NPTX1Q15818 432 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 IRAK1BP1Q5VVH5 260 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 GPR153Q6NV75 609 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 TMEM200AQ86VY9 491 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 OR2A12Q8NGT7 310 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 OR6K6Q8NGW6 343 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MTFMTQ96DP5 389 aaKnown RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 FAM84AQ96KN4 292 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SLC6A16Q9GZN6 736 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 GLTPQ9NZD2 209 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 FETUBQ9UGM5 382 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 USP6P35125 1406 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CPED1A4D0V7 1026 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SPDEFO95238 335 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 HK3P52790 923 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 EEF1A1P68104 462 aaKnown RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 DPYSL3Q14195 570 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ALX1Q15699 326 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 EEF1A1P5Q5VTE0 462 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 NCEH1Q6PIU2 408 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SCUBE3Q8IX30 993 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 YAF2Q8IY57 180 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 PYROXD2Q8N2H3 581 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 GLB1L3Q8NCI6 653 aaPredicted RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 CDCA7Q9BWT1 371 aaPredicted RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 RAVER2Q9HCJ3 691 aaKnown RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 HEBP1Q9NRV9 189 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 TMEM260Q9NX78 707 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MOCS1Q9NZB8 636 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms