RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 EPHA5P54756 1037 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 PRKCZQ05513 592 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 ZNF177Q13360 481 aaPredicted RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 HECTD3Q5T447 861 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 PDZD4Q76G19 769 aaPredicted RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 TRILQ7L0X0 811 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 CENPLQ8N0S6 344 aaPredicted RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 PGBD3Q8N328 593 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 PCDH20Q8N6Y1 951 aaKnown RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 SEMA4DQ92854 862 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 NXNL1Q96CM4 212 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 KCNK4Q9NYG8 393 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 KCNK7Q9Y2U2 307 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 SLC22A23A1A5C7 686 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 A8MXE2 369 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 L7N2F9 121 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 PPEF2O14830 753 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 HCKP08631 526 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 IL1R2P27930 398 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 CST5P28325 142 aaPredicted RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 KIR3DL2P43630 455 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 MARCKSL1P49006 195 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 YBEYP58557 167 aaPredicted RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 GRK1Q15835 563 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 SLC25A24Q6NUK1 477 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 ZNF517Q6ZMY9 492 aaPredicted RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 ETV3LQ6ZN32 361 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 RETREG3Q86VR2 466 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 CTAGE3PQ8IX95 158 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 KRT78Q8N1N4 520 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 SVOPQ8N4V2 548 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 TUBGCP3Q96CW5 907 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 FAM122AQ96E09 287 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 C10orf90Q96M02 699 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 CDT1Q9H211 546 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 UBE2TQ9NPD8 197 aaPredicted RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 NINJ2Q9NZG7 142 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 RCOR3Q9P2K3 495 aaPredicted RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 PISDQ9UG56 409 aa16.55■□□□□ 0.24
CDK11B-201ENST00000340677 NUFIP1Q9UHK0 495 aaKnown RBP16.55■□□□□ 0.24
CDK11B-201ENST00000340677 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 RPS10-NUDT3A0A1W2PQS6 291 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 ARNTLO00327 626 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 AVILO75366 819 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 VTNP04004 478 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 CHRNB2P17787 502 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 MYF6P23409 242 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 SERPINB10P48595 397 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 LLGL1Q15334 1064 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 CRTC2Q53ET0 693 aaPredicted RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 LIN9Q5TKA1 542 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 CHDHQ8NE62 594 aaPredicted RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 C14orf144Q96I85 54 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 POP1Q99575 1024 aaKnown RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 THAP2Q9H0W7 228 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 TOPORSQ9NS56 1045 aaPredicted RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 SLC39A10Q9ULF5 831 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 NDUFAF1Q9Y375 327 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 CCDC85CA6NKD9 419 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 SMAD6O43541 496 aaKnown RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 ZDHHC11BP0C7U3 371 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 GLDCP23378 1020 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 PLA2G16P53816 162 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 MAT1AQ00266 395 aaKnown RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 PRKD1Q15139 912 aaPredicted RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 DGUOKQ16854 277 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 TMEM236Q5W0B7 351 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 MZT2BQ6NZ67 158 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 KCNT2Q6UVM3 1135 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 RBMS3Q6XE24 437 aaKnown RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 SLC26A9Q7LBE3 791 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 FAM71AQ8IYT1 594 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 NANOGP1Q8N7R0 232 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 PHF10Q8WUB8 498 aaKnown RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 BARD1Q99728 777 aaKnown RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 FUNDC2Q9BWH2 189 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 REXO4Q9GZR2 422 aaKnown RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 PDZD7Q9H5P4 517 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 TM9SF3Q9HD45 589 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 TBC1D13Q9NVG8 400 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 RNF186Q9NXI6 227 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 ABCG2Q9UNQ0 655 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 KCNMB2Q9Y691 235 aa16.54■□□□□ 0.24
CDK11B-201ENST00000340677 PDCD11Q14690 1871 aaKnown RBP16.54■□□□□ 0.24
CDK11B-201ENST00000340677 C17orf102A2RUQ5 167 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 MROH6A6NGR9 719 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 E5RJQ4 531 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 GPR32O75388 356 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 IQCF3P0C7M6 154 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 HNMTP50135 292 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 PER3P56645 1201 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 STAT4Q14765 748 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 DCAF4L1Q3SXM0 396 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
CDK11B-201ENST00000340677 ARMC6Q6NXE6 501 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 TAF2Q6P1X5 1199 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 SCIMPQ6UWF3 145 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 RNASE11Q8TAA1 199 aaKnown RBP16.53■□□□□ 0.24
CDK11B-201ENST00000340677 PXYLP1Q8TE99 480 aa16.53■□□□□ 0.24
CDK11B-201ENST00000340677 PCNPQ8WW12 178 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms