RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SCNN1BP51168 640 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 ZIC1Q15915 447 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 ACER2Q5QJU3 275 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 SLC25A25Q6KCM7 469 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 ZNF585AQ6P3V2 769 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 C11orf57Q6ZUT1 292 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-201ENST00000340660 BNIPLQ7Z465 357 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 ADGRG6Q86SQ4 1221 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 PRSS58Q8IYP2 241 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 WDTC1Q8N5D0 677 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 KIAA1191Q96A73 305 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 TBC1D31Q96DN5 1066 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 DEF6Q9H4E7 631 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.49□□□□□ -0.73
ATXN3-201ENST00000340660 SLC24A2Q9UI40 661 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 TEKT2Q9UIF3 430 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 C3orf18Q9UK00 162 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 KRTAP4-8A0A0G2JLE6 195 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 A0A1B0GX78 115 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 A8MUI8 341 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 NPIPA2E9PIF3 369 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 NPIPA3F8WFD2 350 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 GOLGA8SH3BPF8 625 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 TCF21O43680 179 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 PRAMEF11O60813 436 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 VENTXO95231 258 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 CELA3AP09093 270 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 PIM1P11309 404 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-201ENST00000340660 STC1P52823 247 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 AP1S1P61966 158 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 SLC6A3Q01959 620 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 MAPKAPK3Q16644 382 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 RAB6CQ53S08 254 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 HENMT1Q5T8I9 393 aaKnown RBP10.48□□□□□ -0.73
ATXN3-201ENST00000340660 ZBTB37Q5TC79 503 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 TLDC1Q6P9B6 456 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 TTLL10Q6ZVT0 673 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 LRRTM4Q86VH4 590 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 ZNF397Q8NF99 534 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-201ENST00000340660 LRRC46Q96FV0 321 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 NPAS2Q99743 824 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 NRTNQ99748 197 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 UTP23Q9BRU9 249 aaKnown RBP10.48□□□□□ -0.73
ATXN3-201ENST00000340660 RAB6CQ9H0N0 254 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 RIC8BQ9NVN3 520 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 STAP1Q9ULZ2 295 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 PSMD13Q9UNM6 376 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 COQ4Q9Y3A0 265 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-201ENST00000340660 RYR1P21817 5038 aa10.48□□□□□ -0.73
ATXN3-201ENST00000340660 RAI1Q7Z5J4 1906 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-201ENST00000340660 NME2P1O60361 137 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 TMIGD3P0DMS9 266 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-201ENST00000340660 MTHFD1P11586 935 aaKnown RBP10.47□□□□□ -0.73
ATXN3-201ENST00000340660 HLA-DPA1P20036 260 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 BMP5P22003 454 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 YBEYP58557 167 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-201ENST00000340660 SORDQ00796 357 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 NSUN2Q08J23 767 aaKnown RBP eCLIP10.47□□□□□ -0.73
ATXN3-201ENST00000340660 TRAF2Q12933 501 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 PRKAA1Q13131 559 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 MEA1Q16626 185 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 SLC25A52Q3SY17 297 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 PARP15Q460N3 678 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 RIPPLY2Q5TAB7 128 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 KIF18BQ86Y91 864 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 RTL3Q8N8U3 475 aaKnown RBP10.47□□□□□ -0.73
ATXN3-201ENST00000340660 OR4E2Q8NGC2 313 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 OR52N2Q8NGI0 321 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 C7orf25Q9BPX7 421 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 LRRC27Q9C0I9 530 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 C12orf49Q9H741 205 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 IMP3Q9NV31 184 aaKnown RBP10.47□□□□□ -0.73
ATXN3-201ENST00000340660 ZNF407Q9C0G0 2248 aa10.47□□□□□ -0.73
ATXN3-201ENST00000340660 HYKKA2RU49 373 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 GPR89AB7ZAQ6 455 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 SOCS5O75159 536 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 PALMO75781 387 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 GPR89BP0CG08 455 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 NR2F2P24468 414 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 OR1D4P47884 311 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 EFNA3P52797 238 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 STK4Q13043 487 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 TRNP1Q6NT89 227 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 NLRP9Q7RTR0 991 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 OTOAQ7RTW8 1153 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 ATG4DQ86TL0 474 aaPredicted RBP10.46□□□□□ -0.73
ATXN3-201ENST00000340660 METTL27Q8N6F8 245 aaPredicted RBP10.46□□□□□ -0.73
ATXN3-201ENST00000340660 C19orf47Q8N9M1 422 aaKnown RBP10.46□□□□□ -0.73
ATXN3-201ENST00000340660 CELF6Q96J87 481 aaKnown RBP10.46□□□□□ -0.73
ATXN3-201ENST00000340660 DACH2Q96NX9 599 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 PLCD4Q9BRC7 762 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 CINPQ9BW66 212 aaPredicted RBP10.46□□□□□ -0.73
ATXN3-201ENST00000340660 BLZF1Q9H2G9 400 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 KIR3DX1Q9H7L2 352 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 TRIM39Q9HCM9 518 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 IRAK4Q9NWZ3 460 aa10.46□□□□□ -0.73
ATXN3-201ENST00000340660 C6orf203Q9P0P8 240 aaPredicted RBP10.46□□□□□ -0.73
ATXN3-201ENST00000340660 EIF3LQ9Y262 564 aaKnown RBP10.46□□□□□ -0.73
ATXN3-201ENST00000340660 PPIL1Q9Y3C6 166 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms