RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 FER1L5A0AVI2 2057 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 TMEM150CB9EJG8 249 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 KIF2AO00139 706 aaPredicted RBP14.81□□□□□ -0.04
VAPA-201ENST00000340541 SCRG1O75711 98 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 PIAS1O75925 651 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 TSPAN12O95859 305 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 CATP04040 527 aaKnown RBP14.81□□□□□ -0.04
VAPA-201ENST00000340541 CTSBP07858 339 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 FDXRP22570 491 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 PSMB5P28074 263 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 OAS2P29728 719 aaKnown RBP14.81□□□□□ -0.04
VAPA-201ENST00000340541 SKIV2L2P42285 1042 aaKnown RBP14.81□□□□□ -0.04
VAPA-201ENST00000340541 GPX6P59796 221 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 YBX1P67809 324 aaKnown RBP14.81□□□□□ -0.04
VAPA-201ENST00000340541 GPS2Q13227 327 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 DEFB110Q30KQ9 67 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 HECTD2Q5U5R9 776 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 FCRL6Q6DN72 434 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 UGT3A1Q6NUS8 523 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 ZNF517Q6ZMY9 492 aaPredicted RBP14.81□□□□□ -0.04
VAPA-201ENST00000340541 CAPN12Q6ZSI9 719 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 SLC26A11Q86WA9 606 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 ZC3HC1Q86WB0 502 aaKnown RBP14.81□□□□□ -0.04
VAPA-201ENST00000340541 TMEM126BQ8IUX1 230 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 NOA1Q8NC60 698 aaKnown RBP14.81□□□□□ -0.04
VAPA-201ENST00000340541 EEF1AKMT1Q8WVE0 214 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 APOBEC4Q8WW27 367 aaKnown RBP14.81□□□□□ -0.04
VAPA-201ENST00000340541 TRIM4Q9C037 500 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 FAM114A2Q9NRY5 505 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 ZDHHC18Q9NUE0 388 aa14.81□□□□□ -0.04
VAPA-201ENST00000340541 CXorf49A8MYA2 514 aaPredicted RBP14.8□□□□□ -0.04
VAPA-201ENST00000340541 NKX2-8O15522 239 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 CPNE3O75131 537 aaKnown RBP14.8□□□□□ -0.04
VAPA-201ENST00000340541 SLC16A8O95907 504 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 RECKO95980 971 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 RORAP35398 523 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 TLE1Q04724 770 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 CDC20Q12834 499 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 ARHGAP19Q14CB8 494 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 SF1Q15637 639 aaKnown RBP14.8□□□□□ -0.04
VAPA-201ENST00000340541 FAM45BPQ6NSW5 357 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 CYS1Q717R9 158 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 STRA8Q7Z7C7 330 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 LRRC56Q8IYG6 542 aaPredicted RBP14.8□□□□□ -0.04
VAPA-201ENST00000340541 RAB42Q8N4Z0 105 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 GPATCH11Q8N954 259 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 OR2L3Q8NG85 312 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 FAM45AQ8TCE6 357 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 ZNF480Q8WV37 535 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 LRFN5Q96NI6 719 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 FANCEQ9HB96 536 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 LHX9Q9NQ69 397 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 CROTQ9UKG9 612 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 ADAMTS6Q9UKP5 1117 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 PADI1Q9ULC6 663 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 VWA7Q9Y334 891 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 KLK4Q9Y5K2 254 aa14.8□□□□□ -0.04
VAPA-201ENST00000340541 TCRBV9S1A1TA0A576 114 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 MAP3K7O43318 606 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 NRP2O60462 931 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 FKBP9O95302 570 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 MT-ND3P03897 115 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 CASRP41180 1078 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 GRIA3P42263 894 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 ITGA1P56199 1179 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 GUCY2DQ02846 1103 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 LRRC8EQ6NSJ5 796 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 ANKRD12Q6UB98 2062 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 TMEM207Q6UWW9 146 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 UBE2R2Q712K3 238 aaPredicted RBP14.79□□□□□ -0.04
VAPA-201ENST00000340541 PALM2Q8IXS6 379 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 C9orf43Q8TAL5 461 aaPredicted RBP14.79□□□□□ -0.04
VAPA-201ENST00000340541 CT55Q8WUE5 264 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 SMPDL3AQ92484 453 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 TRIM44Q96DX7 344 aaPredicted RBP14.79□□□□□ -0.04
VAPA-201ENST00000340541 LINGO1Q96FE5 620 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 MIPEPQ99797 713 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 SPRTNQ9H040 489 aaPredicted RBP14.79□□□□□ -0.04
VAPA-201ENST00000340541 DMGDHQ9UI17 866 aaKnown RBP14.79□□□□□ -0.04
VAPA-201ENST00000340541 SERTAD3Q9UJW9 196 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 MRPS18BQ9Y676 258 aaKnown RBP14.79□□□□□ -0.04
VAPA-201ENST00000340541 MAST4O15021 2626 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 HECTD1Q9ULT8 2610 aa14.79□□□□□ -0.04
VAPA-201ENST00000340541 HEATR5BQ9P2D3 2071 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 FAM159BA6NKW6 160 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 E7ENX8 843 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 ZBTB14O43829 449 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 CTSVO60911 334 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 GSTA2P09210 222 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 CCNYL3P0C7X3 344 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 TCN2P20062 427 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 IMPA1P29218 277 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 DLSTP36957 453 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 MAGEA4P43358 317 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 GCGRP47871 477 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 RGS4P49798 205 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 PNLIPRP1P54315 467 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 TAP2Q03519 686 aa14.78□□□□□ -0.04
VAPA-201ENST00000340541 ZNF385CQ66K41 422 aaPredicted RBP14.78□□□□□ -0.04
VAPA-201ENST00000340541 LCN10Q6JVE6 187 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms