RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 A6NL46 340 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 KIR2DS3K7RE56 304 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 CD27P26842 260 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 KIR2DS5Q14953 304 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 HKDC1Q2TB90 917 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 TIGD2Q4W5G0 525 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 PNCKQ6P2M8 343 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 SDR16C5Q8N3Y7 309 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 FGF14Q92915 247 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 DEPDC7Q96QD5 511 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 EDEM2Q9BV94 578 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 DNAAF2Q9NVR5 837 aaKnown RBP12.48□□□□□ -0.41
LIN54-201ENST00000340417 ARMCX1Q9P291 453 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 A0A1W2PPC1 479 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 OR1I1O60431 355 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 IRAK1P51617 712 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 TCTE1Q5JU00 501 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 NAT8LQ8N9F0 302 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 VANGL1Q8TAA9 524 aaPredicted RBP12.48□□□□□ -0.41
LIN54-201ENST00000340417 VPS29Q9UBQ0 182 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 PLLPQ9Y342 182 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 ECM29Q5VYK3 1845 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 GSSP48637 474 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 YPEL5P62699 121 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 GCNT6Q5T4J0 391 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 MACC1Q6ZN28 852 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 KIAA2013Q8IYS2 634 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 NAT14Q8WUY8 206 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 SLC6A18Q96N87 628 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 PNPOQ9NVS9 261 aa12.48□□□□□ -0.41
LIN54-201ENST00000340417 FOXD2O60548 495 aaPredicted RBP12.47□□□□□ -0.41
LIN54-201ENST00000340417 KHKP50053 298 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 CASP9P55211 416 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 CDK3Q00526 305 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 NIPAL4Q0D2K0 466 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 KCNC3Q14003 757 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 KIAA1211LQ6NV74 962 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 GALNT7Q86SF2 657 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 ATXN2LQ8WWM7 1075 aaKnown RBP12.47□□□□□ -0.41
LIN54-201ENST00000340417 MGME1Q9BQP7 344 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 CDADC1Q9BWV3 514 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 NEK6Q9HC98 313 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 SLC17A6Q9P2U8 582 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 TRIM24O15164 1050 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 FASP25445 335 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 RSPO2Q6UXX9 243 aaPredicted RBP12.47□□□□□ -0.41
LIN54-201ENST00000340417 CYP2R1Q6VVX0 501 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 NPWQ8N729 165 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 ARRDC3Q96B67 414 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 CDK15Q96Q40 435 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 WNT16Q9UBV4 365 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 NPIPB15A6NHN6 443 aaPredicted RBP12.47□□□□□ -0.41
LIN54-201ENST00000340417 F7P08709 466 aaPredicted RBP12.47□□□□□ -0.41
LIN54-201ENST00000340417 PTGIRP43119 386 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 CCDC81Q6ZN84 652 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 KCNJ9Q92806 393 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 S100A13Q99584 98 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 DPH7Q9BTV6 452 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 HSD3B7Q9H2F3 369 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 SLC17A7Q9P2U7 560 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 AGPSO00116 658 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 CLEC3AO75596 197 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 HMGCLP35914 325 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 RGS8P57771 180 aaPredicted RBP12.47□□□□□ -0.41
LIN54-201ENST00000340417 KCNJ2P63252 427 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 SIM1P81133 766 aaPredicted RBP12.47□□□□□ -0.41
LIN54-201ENST00000340417 KCNJ11Q14654 390 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 C16orf72Q14CZ0 275 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 PHF10Q8WUB8 498 aaKnown RBP12.47□□□□□ -0.41
LIN54-201ENST00000340417 IL17FQ96PD4 163 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 CDC6Q99741 560 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 BDH2Q9BUT1 245 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 KIFC1Q9BW19 673 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 UTS2RQ9UKP6 389 aa12.47□□□□□ -0.41
LIN54-201ENST00000340417 VSTM5A8MXK1 200 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 TP53I11O14683 189 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 RPS15AP62244 130 aaKnown RBP12.46□□□□□ -0.41
LIN54-201ENST00000340417 E2F1Q01094 437 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 FRG2Q64ET8 278 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 TBC1D21Q8IYX1 336 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 FRG2BQ96QU4 278 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 CDRT15Q96T59 188 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 FUT8Q9BYC5 575 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 KCNK13Q9HB14 408 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 B4GALT7Q9UBV7 327 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 EPHA6Q9UF33 1036 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 ANAPC2Q9UJX6 822 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 WASF2Q9Y6W5 498 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 CASP8AP2Q9UKL3 1982 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.46□□□□□ -0.41
LIN54-201ENST00000340417 EFCAB7A8K855 629 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 MPC1LP0DKB6 136 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 AK4P27144 223 aaPredicted RBP12.46□□□□□ -0.41
LIN54-201ENST00000340417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.46□□□□□ -0.41
LIN54-201ENST00000340417 SPIN4Q56A73 249 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 FIGLAQ6QHK4 219 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 LIPIQ6XZB0 460 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 RTL4Q6ZR62 310 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 PAQR9Q6ZVX9 377 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms