RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MLIPQ5VWP3 458 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 ELP2Q6IA86 826 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 CDC42EP5Q6NZY7 148 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 ST14Q9Y5Y6 855 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 ADGRL2O95490 1459 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 TRAFD1O14545 582 aaPredicted RBP12.57□□□□□ -0.4
USP47-202ENST00000339865 SHOXO15266 292 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 CH25HO95992 272 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 IFNA1P01562 189 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 GTF2F2P13984 249 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 EVI2BP34910 448 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 LY6KQ17RY6 165 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 NDC1Q9BTX1 674 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 PLEKHM1Q9Y4G2 1056 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 TRBV23OR9-2A0A075B6M9 112 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 SAP18O00422 153 aaKnown RBP12.57□□□□□ -0.4
USP47-202ENST00000339865 LEPRP48357 1165 aaKnown RBP12.57□□□□□ -0.4
USP47-202ENST00000339865 RHDQ02161 417 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 DYRK1AQ13627 763 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 KANK2Q63ZY3 851 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 NCEH1Q6PIU2 408 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 RHBDF2Q6PJF5 856 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 CHST9Q7L1S5 443 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 KIF18BQ86Y91 864 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 ZNF619Q8N2I2 560 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 DEFB119Q8N690 84 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 OR2B2Q9GZK3 357 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 TLE6Q9H808 572 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
USP47-202ENST00000339865 A0A0A6YYH2 397 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 A6NJ64 397 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 EI24O14681 340 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 TAS2R39P59534 338 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 PRKD1Q15139 912 aaPredicted RBP12.57□□□□□ -0.4
USP47-202ENST00000339865 IFI44LQ53G44 452 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 MRPL41Q8IXM3 137 aaKnown RBP12.57□□□□□ -0.4
USP47-202ENST00000339865 FBXO15Q8NCQ5 510 aaPredicted RBP12.57□□□□□ -0.4
USP47-202ENST00000339865 ZCCHC10Q8TBK6 192 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 SCRN2Q96FV2 425 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 MAP3K14Q99558 947 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 CD97P48960 835 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 GBE1Q04446 702 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 GPRC6AQ5T6X5 926 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 MSANTD2Q6P1R3 559 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 RNF157Q96PX1 679 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 PRDM12Q9H4Q4 367 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 CXCR1P25024 350 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 PON3Q15166 354 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 PPP2R2DQ66LE6 453 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 METTL7BQ6UX53 244 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 ARL14Q8N4G2 192 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 GPR151Q8TDV0 419 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 ARL5BQ96KC2 179 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 AGO4Q9HCK5 861 aaKnown RBP12.57□□□□□ -0.4
USP47-202ENST00000339865 HDCP19113 662 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 FOXO4P98177 505 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 IKBKEQ14164 716 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 SNRNP25Q9BV90 132 aaKnown RBP12.57□□□□□ -0.4
USP47-202ENST00000339865 RPS10P5Q9NQ39 176 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 DNAJC28Q9NX36 388 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 CDC42BPGQ6DT37 1551 aa12.57□□□□□ -0.4
USP47-202ENST00000339865 LOC100130705A0A1B0GUX0 176 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 PCCBP05166 539 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 PAEPP09466 180 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 DNAJA1P31689 397 aaKnown RBP12.56□□□□□ -0.4
USP47-202ENST00000339865 GLP1RP43220 463 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 NR0B1P51843 470 aaKnown RBP12.56□□□□□ -0.4
USP47-202ENST00000339865 TMEM44Q2T9K0 475 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 ARL13AQ5H913 290 aaPredicted RBP12.56□□□□□ -0.4
USP47-202ENST00000339865 RALGPS1Q5JS13 557 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 TNFAIP8L2Q6P589 184 aaPredicted RBP12.56□□□□□ -0.4
USP47-202ENST00000339865 SAMD7Q7Z3H4 446 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 OR2M4Q96R27 311 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 RHOJQ9H4E5 214 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 NMUR1Q9HB89 426 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 LRRC4CQ9HCJ2 640 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 TAS2R14Q9NYV8 317 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 TRAPPC6AO75865 159 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 EIPR1Q53HC9 387 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 SLC15A3Q8IY34 581 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 FITM2Q8N6M3 262 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 BEND7Q8N7W2 519 aaPredicted RBP12.56□□□□□ -0.4
USP47-202ENST00000339865 TXN2Q99757 166 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 ATG5Q9H1Y0 275 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 MIOSQ9NXC5 875 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 TLR6Q9Y2C9 796 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 TMEM265A0A087WTH1 108 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 CHRNA4P43681 627 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 POLR2HP52434 150 aaKnown RBP12.56□□□□□ -0.4
USP47-202ENST00000339865 FASTKD3Q14CZ7 662 aaKnown RBP12.56□□□□□ -0.4
USP47-202ENST00000339865 NDUFA9Q16795 377 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 DPCDQ9BVM2 203 aaPredicted RBP12.56□□□□□ -0.4
USP47-202ENST00000339865 OAZ3Q9UMX2 235 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 MFSD11O43934 449 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 CLEC3AO75596 197 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 RAP2AP10114 183 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 PRKACBP22694 351 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 RPIAP49247 311 aa12.56□□□□□ -0.4
USP47-202ENST00000339865 RPS3AP61247 264 aaKnown RBP12.56□□□□□ -0.4
USP47-202ENST00000339865 SBK1Q52WX2 424 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms