RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PAK6Q9NQU5 681 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SMPD4Q9NXE4 827 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 TRPM5Q9NZQ8 1165 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 NDUFAF1Q9Y375 327 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 PCDHA1Q9Y5I3 950 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 UTRNP46939 3433 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 TCRBV5S1A1TA0A578 114 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 KLRG2A4D1S0 409 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 EFCAB7A8K855 629 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 MPOP05164 745 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 TPOP07202 933 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SLC2A4P14672 509 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ARSBP15848 533 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ADRA1BP35368 520 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 NNMTP40261 264 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 PTPN11Q06124 597 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 GRAPQ13588 217 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.42□□□□□ -0.91e-5■□□□□ 9.3
PTCHD4-201ENST00000339488 HSDL1Q3SXM5 330 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 PYDC2Q56P42 97 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SLC35F1Q5T1Q4 408 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 MANEALQ5VSG8 457 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SLC6A19Q695T7 634 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 GPAT2Q6NUI2 795 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SCYL2Q6P3W7 929 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 AMIGO3Q86WK7 504 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 MAP4K3Q8IVH8 894 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 PGBD5Q8N414 524 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 PAPD5Q8NDF8 572 aaKnown RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 NELL1Q92832 810 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 DNASE1L2Q92874 299 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 C18orf25Q96B23 403 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 RPRD1AQ96P16 312 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SNTG1Q9NSN8 517 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 MIOXQ9UGB7 285 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 PGAP2Q9UHJ9 254 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 TMEFF2Q9UIK5 374 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 OAS3Q9Y6K5 1087 aaKnown RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 CSNK1G3Q9Y6M4 447 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 OR2W5A6NFC9 320 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 CHURC1-FNTBB4DL54 471 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 M0R129 80 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 INPPL1O15357 1258 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 RAD17O75943 681 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 HBQ1P09105 142 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SUPT20HL2P0C7V6 817 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 HLA-DMAP28067 261 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 PRKAR1BP31321 381 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SOX6P35712 828 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 RAP1GAPP47736 663 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 LIMK2P53671 638 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 VSX2P58304 361 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ERVK-25P63136 954 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 CYP4F8P98187 520 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SNAPC1Q16533 368 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 HADHQ16836 314 aaKnown RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 UGT8Q16880 541 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 EXOC3L2Q2M3D2 409 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 AKIRIN2Q53H80 203 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ARHGAP17Q68EM7 881 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 TIGD3Q6B0B8 471 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 RTL4Q6ZR62 310 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 FAM196AQ6ZSG2 479 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 MAMDC2Q7Z304 686 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 DCP1BQ8IZD4 617 aaKnown RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ASZ1Q8WWH4 475 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ROPN1LQ96C74 230 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 MTERF3Q96E29 417 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 FAM84BQ96KN1 310 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 HSD17B14Q9BPX1 270 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 APOL2Q9BQE5 337 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 DPH7Q9BTV6 452 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 CNPPD1Q9BV87 410 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 PAPOLGQ9BWT3 736 aaKnown RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ERVK-6Q9BXR3 956 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 UGT2B28Q9BY64 529 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 CLEC4MQ9H2X3 399 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ZFP64Q9NPA5 681 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 CUEDC1Q9NWM3 386 aaPredicted RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 PKP3Q9Y446 797 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ASB4Q9Y574 426 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 CHD5Q8TDI0 1954 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 EFCAB10A6NFE3 127 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SLCO1B7G3V0H7 640 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 AKAP8O43823 692 aaKnown RBP9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 TULP3O75386 442 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 CD63P08962 238 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ACSL1P33121 698 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 BMP8BP34820 402 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 MAN2A2P49641 1150 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 RBP5P82980 135 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 FAM74A1Q5RGS3 127 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 BMP8AQ7Z5Y6 402 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 ADGRD2Q7Z7M1 963 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 CUZD1Q86UP6 607 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 WDTC1Q8N5D0 677 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 LPAR1Q92633 364 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 TEKT3Q9BXF9 490 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 SLC29A3Q9BZD2 475 aa9.42□□□□□ -0.9
PTCHD4-201ENST00000339488 VNN3Q9NY84 501 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms