RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ALPLP05186 524 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 C1SP09871 688 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 TACR1P25103 407 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 KRT6CP48668 564 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 PGS1Q32NB8 556 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 SERPINA13PQ6UXR4 307 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 CHST14Q8NCH0 376 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 GLB1L3Q8NCI6 653 aaPredicted RBP15.87■□□□□ 0.13
LITAF-201ENST00000339430 ZFYVE19Q96K21 471 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 CCDC115Q96NT0 180 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 LYSMD1Q96S90 227 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 ELOVL6Q9H5J4 265 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 IFT80Q9P2H3 777 aaPredicted RBP15.87■□□□□ 0.13
LITAF-201ENST00000339430 TMPRSS11EQ9UL52 423 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 EYSQ5T1H1 3165 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 GNGT2O14610 69 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 THRBP10828 461 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 IGFBP4P22692 258 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 ITPKAP23677 461 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 EEF1B2P24534 225 aaKnown RBP15.86■□□□□ 0.13
LITAF-201ENST00000339430 RAB39AQ14964 217 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 GPR107Q5VW38 600 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 ASTLQ6HA08 431 aaPredicted RBP15.86■□□□□ 0.13
LITAF-201ENST00000339430 ZDHHC13Q8IUH4 622 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 CHCHD4Q8N4Q1 142 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 NAT16Q8N8M0 369 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 ADAMTS16Q8TE57 1224 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 DTNBP1Q96EV8 351 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 S1PR5Q9H228 398 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 CXorf21Q9HAI6 301 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 TIMMDC1Q9NPL8 285 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 CDH7Q9ULB5 785 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 COLQQ9Y215 455 aaPredicted RBP15.86■□□□□ 0.13
LITAF-201ENST00000339430 SPTBN5Q9NRC6 3674 aaKnown RBP15.86■□□□□ 0.13
LITAF-201ENST00000339430 HEPACAM2A8MVW5 462 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 PRSS23O95084 383 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 OR56A5P0C7T3 313 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 CBSLP0DN79 551 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 CBSP35520 551 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 CDKN2CP42773 168 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 BIRC2Q13490 618 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 PTCHD3Q3KNS1 767 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 NEK5Q6P3R8 708 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 Q6ZVU0 165 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 AADATQ8N5Z0 425 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 ECHDC3Q96DC8 303 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 EGLN2Q96KS0 407 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 PAIP1Q9H074 479 aaKnown RBP15.86■□□□□ 0.13
LITAF-201ENST00000339430 ATG10Q9H0Y0 220 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 ING2Q9H160 280 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 TOR3AQ9H497 397 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 BRD9Q9H8M2 597 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 B4GALT6Q9UBX8 382 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 SLC22A14Q9Y267 594 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 UNC80Q8N2C7 3258 aa15.86■□□□□ 0.13
LITAF-201ENST00000339430 UPK3BL1B0FP48 263 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 UPK3BL2E5RIL1 263 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 C1QCP02747 245 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 MYCLP1P12525 358 aaPredicted RBP15.85■□□□□ 0.13
LITAF-201ENST00000339430 AOAHP28039 575 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 POLR2IP36954 125 aaKnown RBP15.85■□□□□ 0.13
LITAF-201ENST00000339430 HPCAP84074 193 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 DHCR24Q15392 516 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 SMU1Q2TAY7 513 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 CCNYL2Q5T2Q4 361 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 TANGO2Q6ICL3 276 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 GPR180Q86V85 440 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 MICU2Q8IYU8 434 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 BEND7Q8N7W2 519 aaPredicted RBP15.85■□□□□ 0.13
LITAF-201ENST00000339430 GAB3Q8WWW8 586 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 SDCCAG3Q96C92 435 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 APIPQ96GX9 242 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 LMLNQ96KR4 655 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 P2RY13Q9BPV8 354 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 SLC29A3Q9BZD2 475 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 KAT8Q9H7Z6 458 aaKnown RBP15.85■□□□□ 0.13
LITAF-201ENST00000339430 hCG_2014768A0A024R1R8 64 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 H0YAE9 185 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 CLGNO14967 610 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 CYP17A1P05093 508 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 HIST1H2AGP0C0S8 130 aaPredicted RBP15.85■□□□□ 0.13
LITAF-201ENST00000339430 HIST1H2ADP20671 130 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 FCARP24071 287 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 S100A3P33764 101 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 LTBRP36941 435 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 STT3AP46977 705 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 RPS6KA3P51812 740 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 MAPK10P53779 464 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 PON2Q15165 354 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 ZNF648Q5T619 568 aaPredicted RBP15.85■□□□□ 0.13
LITAF-201ENST00000339430 SPESP1Q6UW49 350 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 TMEM26Q6ZUK4 368 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 NETO1Q8TDF5 533 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 SCAMP4Q969E2 229 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 FAM120BQ96EK7 910 aaKnown RBP15.85■□□□□ 0.13
LITAF-201ENST00000339430 HIST1H2AHQ96KK5 128 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 MYADMQ96S97 322 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 HIST1H2AJQ99878 128 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 C19orf43Q9BQ61 176 aa15.85■□□□□ 0.13
LITAF-201ENST00000339430 H2AFJQ9BTM1 129 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms