RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 KIAA1161Q6NSJ0 714 aa21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 TMPRSS11BQ86T26 416 aa21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 HOPXQ9BPY8 73 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 PHPT1Q9NRX4 125 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 CMTM6Q9NX76 183 aa21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 LEF1Q9UJU2 399 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 H3BNX3 289 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 IFRD1O00458 451 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 JAK1P23458 1154 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 TAP2Q03519 686 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 USP39Q53GS9 565 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 COQ5Q5HYK3 327 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 SAMD4BQ5PRF9 694 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 CAPN13Q6MZZ7 669 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 HORMAD1Q86X24 394 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 MINDY1Q8N5J2 469 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 FAM131CQ96AQ9 280 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 ASB9Q96DX5 294 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 OSGEPL1Q9H4B0 414 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 C8orf33Q9H7E9 229 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 TRPV5Q9NQA5 729 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 PLEKHM1Q9Y4G2 1056 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 KCNE2Q9Y6J6 123 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 NPPBP16860 134 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 TACR1P25103 407 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 SF1Q15637 639 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 MAP7D1Q3KQU3 841 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 METRNLQ641Q3 311 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 DUS1LQ6P1R4 473 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 CYP2R1Q6VVX0 501 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 SPATA24Q86W54 205 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 FLCNQ8NFG4 579 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 WDR20Q8TBZ3 569 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 APOLD1Q96LR9 279 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 DPY30Q9C005 99 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 SGK2Q9HBY8 427 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 NMRK1Q9NWW6 199 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 SUCOQ9UBS9 1254 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 COL4A2P08572 1712 aa21.72■■□□□ 1.07
PDLIM2-203ENST00000339162 SHISA7A6NL88 538 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 KMOO15229 486 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 MYCLP1P12525 358 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 SOX11P35716 441 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 VHLP40337 213 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 CLCNKAP51800 687 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 TFF2Q03403 129 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 SKIV2LQ15477 1246 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 FAM174BQ3ZCQ3 159 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 KIAA2013Q8IYS2 634 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 PLCD3Q8N3E9 789 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 TMEM74Q96NL1 305 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 TSSK3Q96PN8 268 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 KCNK6Q9Y257 313 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 CA5BQ9Y2D0 317 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 WDR37Q9Y2I8 494 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 MBTPS2O43462 519 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 UGDHO60701 494 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 ACADMP11310 421 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 NDUFV2P19404 249 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 POU3F3P20264 500 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 ACSL1P33121 698 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 PNLIPRP1P54315 467 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 CLDN2P57739 230 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 C6orf10Q5SRN2 563 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 KLHDC8AQ8IYD2 350 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 LRRC56Q8IYG6 542 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 OXR1Q8N573 874 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 EBPLQ9BY08 206 aa21.71■■□□□ 1.07
PDLIM2-203ENST00000339162 CEACAM5P06731 702 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 RPSAP08865 295 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 PCNAP12004 261 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 MRPS21P82921 87 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 MEF2AQ02078 507 aaPredicted RBP21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 RPA4Q13156 261 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 TCEA2Q15560 299 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 LRRC36Q1X8D7 754 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 SMU1Q2TAY7 513 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 SPANXN4Q5MJ08 99 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 THEMIS2Q5TEJ8 643 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 GRHL2Q6ISB3 625 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 UNC5DQ6UXZ4 953 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 SLCO4C1Q6ZQN7 724 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 EGLN2Q96KS0 407 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 ACAT2Q9BWD1 397 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 FBRSQ9HAH7 460 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 ABCD2Q9UBJ2 740 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 NDRG2Q9UN36 371 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 POM121BA6NF01 834 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 GCKP35557 465 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 CCR3P51677 355 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 DHDDSQ86SQ9 333 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 IFNEQ86WN2 208 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 GFM2Q969S9 779 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 CMTM7Q96FZ5 175 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 PPM1MQ96MI6 270 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 UHRF1Q96T88 793 aaPredicted RBP21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 SGPP1Q9BX95 441 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 EGFL7Q9UHF1 273 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 NCKAP1Q9Y2A7 1128 aa21.7■■□□□ 1.06
PDLIM2-203ENST00000339162 PCDHA9Q9Y5H5 950 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms