RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 LY75O60449 1722 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 SLC28A1O00337 649 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 SUV39H1O43463 412 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 CLDN9O95484 217 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 PDYNP01213 254 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 NUDT7P0C024 238 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 CKMT1AP12532 417 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 CHI3L1P36222 383 aaPredicted RBP13.78□□□□□ -0.2
PCDH8-201ENST00000338862 DPY19L1Q2PZI1 675 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 SLC34A3Q8N130 599 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 TTYH2Q9BSA4 534 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 ARNT2Q9HBZ2 717 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 C11orf16Q9NQ32 467 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 RAD18Q9NS91 495 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 VNN3Q9NY84 501 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 NUDT4Q9NZJ9 180 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 KCNH4Q9UQ05 1017 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 FAM92AA1XBS5 289 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 TNFRSF11BO00300 401 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 SNX4O95219 450 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 BCL2L1Q07817 233 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 CHIT1Q13231 466 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 ARMCX4Q5H9R4 360 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 CTSL3PQ5NE16 218 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 C10orf111Q8N326 155 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 TCAIMQ8N3R3 496 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 OR4K1Q8NGD4 311 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 SAMD4AQ9UPU9 718 aaKnown RBP13.78□□□□□ -0.2
PCDH8-201ENST00000338862 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 ACSL4O60488 711 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 SOX14O95416 240 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 IL6P05231 212 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 HNF4AP41235 474 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 YBEYP58557 167 aaPredicted RBP13.78□□□□□ -0.2
PCDH8-201ENST00000338862 CHRNA6Q15825 494 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 HKDC1Q2TB90 917 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 TYW3Q6IPR3 259 aaKnown RBP13.78□□□□□ -0.2
PCDH8-201ENST00000338862 COLGALT2Q8IYK4 626 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 ALDH16A1Q8IZ83 802 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 LKAAEAR1Q8TD35 194 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 TP63Q9H3D4 680 aaPredicted RBP13.78□□□□□ -0.2
PCDH8-201ENST00000338862 SNX6Q9UNH7 406 aa13.78□□□□□ -0.2
PCDH8-201ENST00000338862 LAMA3Q16787 3333 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 MGAMO43451 1857 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 LOC285095A0A1B0GVY8 99 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 PRRG1O14668 218 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 TRBC1P01850 177 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 HTR1AP08908 422 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 CD40LGP29965 261 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 OR1D2P34982 312 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 MFSD14CQ5VZR4 134 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 DHRS4L2Q6PKH6 230 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 STK40Q8N2I9 435 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 CELF2-AS1Q8N7Q2 184 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 ZNF548Q8NEK5 533 aaPredicted RBP13.77□□□□□ -0.2
PCDH8-201ENST00000338862 MTERF3Q96E29 417 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 SLC25A37Q9NYZ2 338 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 PRSS21Q9Y6M0 314 aa13.77□□□□□ -0.2
PCDH8-201ENST00000338862 MANBAO00462 879 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 STX16O14662 325 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 ESR1P03372 595 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 IFI30P13284 250 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 PTGER3P43115 390 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 ISL1P61371 349 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 PCBP1Q15365 356 aaKnown RBP eCLIP13.77□□□□□ -0.21
PCDH8-201ENST00000338862 RFX4Q33E94 735 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 FAM171BQ6P995 826 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 AADATQ8N5Z0 425 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 ZBTB2Q8N680 514 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 DTX3Q8N9I9 347 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 STARD8Q92502 1023 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 APIPQ96GX9 242 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 GPN2Q9H9Y4 310 aaPredicted RBP13.77□□□□□ -0.21
PCDH8-201ENST00000338862 CSNK1G1Q9HCP0 422 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 ADPRHL2Q9NX46 363 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 PCDHGA10Q9Y5H3 936 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 WDR81Q562E7 1941 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 MBLAC1A4D2B0 266 aaPredicted RBP13.77□□□□□ -0.21
PCDH8-201ENST00000338862 OR7A17O14581 309 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 PRSS23O95084 383 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 CKMP06732 381 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 SLC6A4P31645 630 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 KRT20P35900 424 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 FEN1P39748 380 aaKnown RBP13.77□□□□□ -0.21
PCDH8-201ENST00000338862 ZNF157P51786 506 aaPredicted RBP13.77□□□□□ -0.21
PCDH8-201ENST00000338862 PHC1P78364 1004 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 VLDLRP98155 873 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 PURAQ00577 322 aaKnown RBP13.77□□□□□ -0.21
PCDH8-201ENST00000338862 BEND7Q8N7W2 519 aaPredicted RBP13.77□□□□□ -0.21
PCDH8-201ENST00000338862 VPS37AQ8NEZ2 397 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 VANGL1Q8TAA9 524 aaPredicted RBP13.77□□□□□ -0.21
PCDH8-201ENST00000338862 NEK6Q9HC98 313 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 DNMT3LQ9UJW3 386 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 BRCA2P51587 3418 aa13.77□□□□□ -0.21
PCDH8-201ENST00000338862 CTDSP2O14595 271 aa13.76□□□□□ -0.21
PCDH8-201ENST00000338862 PTNP21246 168 aa13.76□□□□□ -0.21
PCDH8-201ENST00000338862 ATP6V1E1P36543 226 aa13.76□□□□□ -0.21
PCDH8-201ENST00000338862 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
PCDH8-201ENST00000338862 TIAL1Q01085 375 aaKnown RBP eCLIP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms