RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 EFCAB9A8MZ26 197 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 KCNJ13O60928 360 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 VPS26AO75436 327 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 CYBBP04839 570 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 CR2P20023 1033 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 CCND3P30281 292 aaPredicted RBP20.12■□□□□ 0.81
SPNS1-203ENST00000334536 SLC11A2P49281 568 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 EEFSECP57772 596 aaKnown RBP20.12■□□□□ 0.81
SPNS1-203ENST00000334536 SREBF2Q12772 1141 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 IKZF1Q13422 519 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 PXDC1Q5TGL8 231 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 FAM219BQ5XKK7 198 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 OR7D4Q8NG98 312 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 LRCH3Q96II8 777 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 TTLL2Q9BWV7 592 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 NIPAL2Q9H841 368 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 IL1RL2Q9HB29 575 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 BTRCQ9Y297 605 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 AUP1Q9Y679 476 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 COMMD10Q9Y6G5 202 aa20.12■□□□□ 0.81
SPNS1-203ENST00000334536 H7C4K7 107 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 PKMP14618 531 aaKnown RBP20.11■□□□□ 0.81
SPNS1-203ENST00000334536 LPOP22079 712 aaPredicted RBP20.11■□□□□ 0.81
SPNS1-203ENST00000334536 MLLT3P42568 568 aaPredicted RBP20.11■□□□□ 0.81
SPNS1-203ENST00000334536 IL12RB1P42701 662 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 KCNQ1P51787 676 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 KCNK10P57789 538 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 ISL1P61371 349 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 POU6F2P78424 691 aaPredicted RBP20.11■□□□□ 0.81
SPNS1-203ENST00000334536 TNK1Q13470 666 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 CLCA4Q14CN2 919 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 GPAT3Q53EU6 434 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 XKR7Q5GH72 579 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 ZNF691Q5VV52 312 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 LAIR2Q6ISS4 152 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 CFAP52Q8N1V2 620 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 OR56A4Q8NGH8 313 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 SLC7A6Q92536 515 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 ZIC5Q96T25 663 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 GPR21Q99679 349 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 BRINP2Q9C0B6 783 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 ARHGAP39Q9C0H5 1083 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 REXO4Q9GZR2 422 aaKnown RBP20.11■□□□□ 0.81
SPNS1-203ENST00000334536 SEMA4BQ9NPR2 832 aaPredicted RBP20.11■□□□□ 0.81
SPNS1-203ENST00000334536 EHD3Q9NZN3 535 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 GMPR2Q9P2T1 348 aaKnown RBP20.11■□□□□ 0.81
SPNS1-203ENST00000334536 FAM50BQ9Y247 325 aa20.11■□□□□ 0.81
SPNS1-203ENST00000334536 UPK1AO00322 258 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 CA12O43570 354 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 VNN2O95498 520 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 PRSS56P0CW18 603 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 GTF2E2P29084 291 aaKnown RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 SLC6A4P31645 630 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 TTPAP49638 278 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 BAMBIQ13145 260 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 RCAN2Q14206 197 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 MBTPS1Q14703 1052 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 PTPRNQ16849 979 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 OTUD3Q5T2D3 398 aaPredicted RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 SPATC1Q76KD6 591 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 SVOPLQ8N434 492 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 TMEM125Q96AQ2 219 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 DMRTB1Q96MA1 342 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 MBOAT4Q96T53 435 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 GPR62Q9BZJ7 368 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 CCDC90BQ9GZT6 254 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 DUSP21Q9H596 190 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 ELAC1Q9H777 363 aaKnown RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 NTN4Q9HB63 628 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 TRMT6Q9UJA5 497 aaKnown RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 PCTPQ9UKL6 214 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 IKZF3Q9UKT9 509 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 USP22Q9UPT9 525 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 CHD5Q8TDI0 1954 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 SLC38A8A6NNN8 435 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 H3BNC9 293 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 CDC7O00311 574 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 TRIM3O75382 744 aaPredicted RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 CLDN11O75508 207 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 EEDO75530 441 aaKnown RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 NPPAP01160 153 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 CHRM3P20309 590 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 ALDH4A1P30038 563 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 ATP5C1P36542 298 aaKnown RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 CBX5P45973 191 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 CLCN4P51793 760 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 LSM3P62310 102 aaKnown RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 METTL2BQ6P1Q9 378 aaKnown RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 PRR23BQ6ZRT6 265 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 SYVN1Q86TM6 617 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 MDGA1Q8NFP4 955 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 SPON2Q9BUD6 331 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 CRISPLD1Q9H336 500 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 GLTPQ9NZD2 209 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 ZIM2Q9NZV7 527 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 LEF1Q9UJU2 399 aaPredicted RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 ZFP37Q9Y6Q3 630 aaPredicted RBP20.1■□□□□ 0.81
SPNS1-203ENST00000334536 HSPE1-MOB4S4R3N1 261 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 VWA8A3KMH1 1905 aa20.1■□□□□ 0.81
SPNS1-203ENST00000334536 LINC00862A6NCI5 91 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms