RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 GBAP04062 536 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 PTGS2P35354 604 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 DPP6P42658 865 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 SNRPD2P62316 118 aaKnown RBP13.72□□□□□ -0.21
EPHB3-201ENST00000330394 TARDBPQ13148 414 aaKnown RBP eCLIP13.72□□□□□ -0.21
EPHB3-201ENST00000330394 HKDC1Q2TB90 917 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 TIGD4Q8IY51 512 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 OSBPL2Q9H1P3 480 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 FAM124BQ9H5Z6 455 aaPredicted RBP13.72□□□□□ -0.21
EPHB3-201ENST00000330394 AGPAT4Q9NRZ5 378 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 DNAJC27Q9NZQ0 273 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 MTX2O75431 263 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 SERPINB7O75635 380 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 CCNDBP1O95273 360 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 IQCF3P0C7M6 154 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 HAPLN1P10915 354 aaPredicted RBP13.72□□□□□ -0.21
EPHB3-201ENST00000330394 ANXA8P13928 327 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 PRDX3P30048 256 aaKnown RBP13.72□□□□□ -0.21
EPHB3-201ENST00000330394 CSTF2P33240 577 aaKnown RBP eCLIP13.72□□□□□ -0.21
EPHB3-201ENST00000330394 ATP4BP51164 291 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 EMX2Q04743 252 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 SETMARQ53H47 684 aaPredicted RBP13.72□□□□□ -0.21
EPHB3-201ENST00000330394 PIK3R6Q5UE93 754 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 MEIOBQ8N635 442 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 FCRL4Q96PJ5 515 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 RWDD3Q9Y3V2 267 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 PCDHGA3Q9Y5H0 932 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 PPP2R3BQ9Y5P8 575 aa13.72□□□□□ -0.21
EPHB3-201ENST00000330394 MAP1BP46821 2468 aaKnown RBP13.71□□□□□ -0.21
EPHB3-201ENST00000330394 NME6O75414 186 aaPredicted RBP13.71□□□□□ -0.21
EPHB3-201ENST00000330394 MYL9P24844 172 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 LEPRP48357 1165 aaKnown RBP13.71□□□□□ -0.21
EPHB3-201ENST00000330394 GNG2P59768 71 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 UGT8Q16880 541 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 SLC36A3Q495N2 470 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 VTCN1Q7Z7D3 282 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 RAVER1Q8IY67 606 aaKnown RBP13.71□□□□□ -0.21
EPHB3-201ENST00000330394 RPL3LQ92901 407 aaKnown RBP13.71□□□□□ -0.21
EPHB3-201ENST00000330394 CORO1BQ9BR76 489 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 WACQ9BTA9 647 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 ASPNQ9BXN1 380 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 DIABLOQ9NR28 239 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 MTMR10Q9NXD2 777 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 TIAM2Q8IVF5 1701 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 SLC35F4A4IF30 521 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 ARHGEF33A8MVX0 844 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 TMX2-CTNND1H3BSU7 103 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 HOXB6P17509 224 aaKnown RBP13.71□□□□□ -0.21
EPHB3-201ENST00000330394 CORO1AP31146 461 aaKnown RBP13.71□□□□□ -0.21
EPHB3-201ENST00000330394 MAPK12P53778 367 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 ABHD18Q0P651 414 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 NDUFAF6Q330K2 333 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 GPR142Q7Z601 462 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 DTX3Q8N9I9 347 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 ZNF675Q8TD23 568 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 C12orf42Q96LP6 360 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 FRMD6Q96NE9 622 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 ZNF717Q9BY31 904 aaPredicted RBP13.71□□□□□ -0.21
EPHB3-201ENST00000330394 PCDH10Q9P2E7 1040 aa13.71□□□□□ -0.21
EPHB3-201ENST00000330394 A6NL46 340 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 ACOT8O14734 319 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 SMPD1P17405 629 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 SMIM11AP58511 58 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 CSTF1Q05048 431 aaKnown RBP13.71□□□□□ -0.22
EPHB3-201ENST00000330394 DESI1Q6ICB0 168 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 LYSMD3Q7Z3D4 306 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 PHC2Q8IXK0 858 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF433Q8N7K0 673 aaPredicted RBP13.71□□□□□ -0.22
EPHB3-201ENST00000330394 PTERQ96BW5 349 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 COL21A1Q96P44 957 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 OSBPL10Q9BXB5 764 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 TTYH1Q9H313 450 aaPredicted RBP13.71□□□□□ -0.22
EPHB3-201ENST00000330394 GSTO2Q9H4Y5 243 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 KRCC1Q9NPI7 259 aaPredicted RBP13.71□□□□□ -0.22
EPHB3-201ENST00000330394 RIMKLBQ9ULI2 386 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 SLC22A14Q9Y267 594 aa13.71□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF487B1APH4 448 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 CLDN11O75508 207 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 RLN1P04808 185 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 FYNP06241 537 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 BMP7P18075 431 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 MTAPQ13126 283 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF267Q14586 743 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 NHSL2Q5HYW2 709 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 DEFB128Q7Z7B8 93 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 TMEM125Q96AQ2 219 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 EXOSC8Q96B26 276 aaKnown RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF607Q96SK3 696 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 DPH2Q9BQC3 489 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 C12orf4Q9NQ89 552 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 EIF3KQ9UBQ5 218 aaKnown RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF510Q9Y2H8 683 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 C7P10643 843 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 GADD45AP24522 165 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 SOX4Q06945 474 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 HSPB3Q12988 150 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 NFE2L1Q14494 772 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 PCBP1Q15365 356 aaKnown RBP eCLIP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 TAF1AQ15573 450 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 TUBA3EQ6PEY2 450 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms