RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 MATN3O15232 486 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 CCNCP24863 283 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 DLX5P56178 289 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 ZNF33BQ06732 778 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 KLC1Q07866 573 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 NIPAL4Q0D2K0 466 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 GALNT2Q10471 571 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 KIF5AQ12840 1032 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 NCBP2-AS2Q69YL0 99 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 C11orf63Q6NUN7 778 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 RFX6Q8HWS3 928 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 CCDC71Q8IV32 467 aaPredicted RBP14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 ADGRF3Q8IZF5 1079 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 DENND1AQ8TEH3 1009 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 TMEM158Q8WZ71 300 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 FATE1Q969F0 183 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 TSGA13Q96PP4 275 aa14.08□□□□□ -0.16
CTHRC1-201ENST00000330295 BTNL10A8MVZ5 291 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 H7C1Q1 480 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 DSCR3O14972 297 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 PPP1R12AO14974 1030 aaPredicted RBP14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 MFSD11O43934 449 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 PIRTP0C851 137 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 ITGAMP11215 1152 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 PDK1Q15118 436 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 C16orf47Q6ZP98 133 aaPredicted RBP14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 NEK10Q6ZWH5 1172 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 NLRP9Q7RTR0 991 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 CD163Q86VB7 1156 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 CPNE8Q86YQ8 564 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 RCOR2Q8IZ40 523 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 DNAJC22Q8N4W6 341 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 RNF25Q96BH1 459 aaPredicted RBP14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 RBM41Q96IZ5 413 aaKnown RBP14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 ADGRE3Q9BY15 652 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 HES7Q9BYE0 225 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 TFB2MQ9H5Q4 396 aaKnown RBP14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 KLHL1Q9NR64 748 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 FAM8A1Q9UBU6 413 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 C3orf18Q9UK00 162 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 PLCL2Q9UPR0 1127 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 HEY1Q9Y5J3 304 aa14.07□□□□□ -0.16
CTHRC1-201ENST00000330295 MGAT4DA6NG13 374 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 CRLF1O75462 422 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 EEF1DP29692 281 aaKnown RBP14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 NR2C2P49116 596 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 FNBP1LQ5T0N5 605 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 ARSKQ6UWY0 536 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 AMIGO1Q86WK6 493 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 CCDC50Q8IVM0 306 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 PQLC3Q8N755 202 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 ARMC2Q8NEN0 867 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 OR52E1Q8NGJ3 308 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 FAM57AQ8TBR7 257 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 SEC16BQ96JE7 1060 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 GPR63Q9BZJ6 419 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 MAGEE1Q9HCI5 957 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 RBM22Q9NW64 420 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 TRPS1Q9UHF7 1281 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 TEKT2Q9UIF3 430 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 ZNF711Q9Y462 761 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 HYOU1Q9Y4L1 999 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 HRH3Q9Y5N1 445 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 ANK2Q01484 3957 aa14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 SNRNP200O75643 2136 aaKnown RBP14.06□□□□□ -0.16
CTHRC1-201ENST00000330295 PHF3Q92576 2039 aaKnown RBP14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 IGHV1-45A0A0A0MS14 117 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 A0A1W2PQ72 361 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 A6NNC1 897 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 SMAD7O15105 426 aaKnown RBP14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 UGT2B7P16662 529 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 PTGS2P35354 604 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 OR1D4P47884 311 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 GBE1Q04446 702 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 EEF1A2Q05639 463 aaKnown RBP14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 CCDC181Q5TID7 509 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 SLC9A4Q6AI14 798 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 RAD9BQ6WBX8 426 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 PRSS58Q8IYP2 241 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 KATNAL2Q8IYT4 538 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 SYCE1Q8N0S2 351 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 MDS2Q8NDY4 140 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 OR2L2Q8NH16 312 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 STT3BQ8TCJ2 826 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 MAML1Q92585 1016 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 SCMH1Q96GD3 660 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 SIGLEC12Q96PQ1 595 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 FERD3LQ96RJ6 166 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 FERMT1Q9BQL6 677 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 XKR8Q9H6D3 395 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 DMRT3Q9NQL9 472 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 CUTCQ9NTM9 273 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 RIC8BQ9NVN3 520 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 EURLQ9NYK6 297 aa14.05□□□□□ -0.16
CTHRC1-201ENST00000330295 A0A0J9YY10 115 aa14.04□□□□□ -0.16
CTHRC1-201ENST00000330295 KLHL33A6NCF5 533 aa14.04□□□□□ -0.16
CTHRC1-201ENST00000330295 SNPHO15079 494 aa14.04□□□□□ -0.16
CTHRC1-201ENST00000330295 ARHGEF9O43307 516 aa14.04□□□□□ -0.16
CTHRC1-201ENST00000330295 PTMAP06454 111 aaKnown RBP14.04□□□□□ -0.16
CTHRC1-201ENST00000330295 POLBP06746 335 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms