RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 FZD4Q9ULV1 537 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 NR5A2O00482 541 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 RGS14O43566 566 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 KRT6AP02538 564 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 KRT6BP04259 564 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 SMIM18P0DKX4 95 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 IGFALSP35858 605 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 HALP42357 657 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 KRT6CP48668 564 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 UFM1P61960 85 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 PPP2CBP62714 309 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 PPP2CAP67775 309 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 CHIT1Q13231 466 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 VPS26BQ4G0F5 336 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 RGL4Q8IZJ4 473 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 ASB9Q96DX5 294 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 PPP3R2Q96LZ3 170 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 PREBQ9HCU5 417 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 UBAP1Q9NZ09 502 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 NCKAP1Q9Y2A7 1128 aa19.67■□□□□ 0.74
RIPPLY3-201ENST00000329553 MRASO14807 208 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 SLC31A1O15431 190 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 PDYNP01213 254 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 C7P10643 843 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 NDUFV2P19404 249 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 CAPN3P20807 821 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 NEK2P51955 445 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 PSME3P61289 254 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 FBXO43Q4G163 708 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 PDCD4Q53EL6 469 aaKnown RBP19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 EOGTQ5NDL2 527 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 BLOC1S3Q6QNY0 202 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 KIAA1324Q6UXG2 1013 aaKnown RBP19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 USP30Q70CQ3 517 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 RETREG3Q86VR2 466 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 KLHDC8AQ8IYD2 350 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 ZNF480Q8WV37 535 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 LRCH3Q96II8 777 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 EPB41L1Q9H4G0 881 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 SLC52A3Q9NQ40 469 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 SUCOQ9UBS9 1254 aaKnown RBP19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 DNMT3AQ9Y6K1 912 aaPredicted RBP19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 A0A1W2PPC1 479 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 ACADMP11310 421 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 SLC2A4P14672 509 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 ZFP36L2P47974 494 aaKnown RBP19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 CLCN2P51788 898 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 RPA4Q13156 261 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 IL23RQ5VWK5 629 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 OXR1Q8N573 874 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 TMEM102Q8N9M5 508 aaPredicted RBP19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 LMNTD1Q8N9Z9 388 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 OR9A1PQ8NGU1 263 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 MYOCQ99972 504 aa19.66■□□□□ 0.74
RIPPLY3-201ENST00000329553 KMOO15229 486 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 SLC22A3O75751 556 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 G6PDP11413 515 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 MYCLP1P12525 358 aaPredicted RBP19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 IRF8Q02556 426 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 IMPG1Q17R60 797 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 METRNLQ641Q3 311 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 LAYNQ6UX15 382 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 HOMEZQ8IX15 550 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 FAM156AQ8NDB6 213 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 SELENOMQ8WWX9 145 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 C1QTNF7Q9BXJ2 289 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 MRPL40Q9NQ50 206 aaKnown RBP19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 MAP10Q9P2G4 905 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 MMP17Q9ULZ9 603 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 SNX6Q9UNH7 406 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 AP4B1Q9Y6B7 739 aa19.65■□□□□ 0.74
RIPPLY3-201ENST00000329553 SMIM31A0A1B0GVY4 71 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 GPR89AB7ZAQ6 455 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 E7EQ34 232 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 GPR89BP0CG08 455 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 CD22P20273 847 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 IL12AP29459 219 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 GNPDA1P46926 289 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 TRIM25Q14258 630 aaKnown RBP19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 PDZD3Q86UT5 571 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 PROKR1Q8TCW9 393 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 ACPTQ9BZG2 426 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 ELOVL6Q9H5J4 265 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 CNOT11Q9UKZ1 510 aaKnown RBP19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 NDRG2Q9UN36 371 aaKnown RBP19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 ASF1AQ9Y294 204 aa19.64■□□□□ 0.74
RIPPLY3-201ENST00000329553 E7ENX8 843 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 CEACAM5P06731 702 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 C8BP07358 591 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 JUPP14923 745 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 ACSL1P33121 698 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 ATXN3P54252 364 aaPredicted RBP19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 RPL38P63173 70 aaKnown RBP19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 XKR6Q5GH73 641 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 LIPJQ5W064 366 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 UNC5DQ6UXZ4 953 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 CHST15Q7LFX5 561 aaPredicted RBP19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 SPATA24Q86W54 205 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 SYTL1Q8IYJ3 562 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 APOOQ9BUR5 198 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms