RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CHIT1Q13231 466 aa13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 SPCS2Q15005 226 aa13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 PLEKHG6Q3KR16 790 aa13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 LYPLAL1Q5VWZ2 237 aa13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 RAB2BQ8WUD1 216 aa13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 SCAMP4Q969E2 229 aa13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 KCNH6Q9H252 994 aa13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 SERHLQ9NQF3 203 aa13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 RASSF1Q9NS23 344 aa13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 INTS6Q9UL03 887 aaKnown RBP13.67□□□□□ -0.22
ATP2C1-201ENST00000328560 OR2AG2A6NM03 316 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ABLIM3O94929 683 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ANGPTL1O95841 491 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 HPRP00739 348 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 NTRK1P04629 796 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 KIR3DL1P43629 444 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 MAP2K4P45985 399 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 B4GALNT1Q00973 533 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ABRQ12979 859 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 CARD16Q5EG05 197 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ATG9BQ674R7 924 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ANGPTL8Q6UXH0 198 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ZNF554Q86TJ5 538 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 LZICQ8WZA0 190 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 REXO4Q9GZR2 422 aaKnown RBP13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 AASDHPPTQ9NRN7 309 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 TMEM9Q9P0T7 183 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 SLCO3A1Q9UIG8 710 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 OCM2P0CE71 109 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 OCMP0CE72 109 aaPredicted RBP13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 LHCGRP22888 699 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 GSTM2P28161 218 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 HTR1BP28222 390 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ARHGDIAP52565 204 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 MLLT10P55197 1068 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 IRF8Q02556 426 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 EPS8Q12929 822 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 USP45Q70EL2 814 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 CEP68Q76N32 757 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 TMCO5AQ8N6Q1 288 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 MCOLN3Q8TDD5 553 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 FOXJ1Q92949 421 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 MED8Q96G25 268 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 P2RY13Q9BPV8 354 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ATP11BQ9Y2G3 1177 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 INSL5Q9Y5Q6 135 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 GBF1Q92538 1859 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 A0A096LPI6 279 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 TRBV5-4A0A0C4DH59 114 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 FPGTO14772 594 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 COX7A2P14406 83 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ENGP17813 658 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 TLE2Q04725 743 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 CDKN3Q16667 212 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 TPRG1Q6ZUI0 275 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 HORMAD1Q86X24 394 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 CLECL1Q8IZS7 167 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ELMOD1Q8N336 334 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ATG16L2Q8NAA4 619 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ELMO1Q92556 727 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 MAGED4Q96JG8 741 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ARMC7Q9H6L4 198 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 PAK1IP1Q9NWT1 392 aaPredicted RBP13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 SPG21Q9NZD8 308 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 KIF17Q9P2E2 1029 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 ERVK-18Q9QC07 812 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 GMEB1Q9Y692 573 aa13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 MKI67P46013 3256 aaKnown RBP13.66□□□□□ -0.22
ATP2C1-201ENST00000328560 CLIC1O00299 241 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 BCAS1O75363 584 aaPredicted RBP13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 PSMB9P28065 219 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 ISL1P61371 349 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 SNRPD1P62314 119 aaKnown RBP13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 PTSQ03393 145 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 GRSF1Q12849 480 aaKnown RBP eCLIP13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 MOGQ16653 247 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 DPY19L1Q2PZI1 675 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 Q6ZNX1 250 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 ZNF551Q7Z340 670 aaPredicted RBP13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 CYP4Z1Q86W10 505 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 RHNO1Q9BSD3 238 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 SLC29A3Q9BZD2 475 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 SUV39H2Q9H5I1 410 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 PDP1Q9P0J1 537 aaPredicted RBP13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 KIAA1522Q9P206 1035 aaPredicted RBP13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 FBXO10Q9UK96 956 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 FAM220BPB1ANY3 271 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 RETP07949 1114 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 ABCB1P08183 1280 aaPredicted RBP13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 MAPK8P45983 427 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 SMN1Q16637 294 aaKnown RBP13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 LAIR2Q6ISS4 152 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 NOXRED1Q6NXP6 359 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 DPY19L3Q6ZPD9 716 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 HIPK1Q86Z02 1210 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 ERLEC1Q96DZ1 483 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 TMEM39AQ9NV64 488 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 FAIMQ9NVQ4 179 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 DNMT3BQ9UBC3 853 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms