RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 H3BQ06 376 aaPredicted RBP14.47□□□□□ -0.09
TPM3-205ENST00000328159 DNAJA2O60884 412 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 STAMBPO95630 424 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 C8BP07358 591 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 PNLIPRP1P54315 467 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 ADPRHP54922 357 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 E2F2Q14209 437 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 CMPK2Q5EBM0 449 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 COL13A1Q5TAT6 717 aaPredicted RBP14.47□□□□□ -0.09
TPM3-205ENST00000328159 METRNLQ641Q3 311 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 SLCO4C1Q6ZQN7 724 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 PRR23BQ6ZRT6 265 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 ARPINQ7Z6K5 226 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 HORMAD1Q86X24 394 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 LRRC56Q8IYG6 542 aaPredicted RBP14.47□□□□□ -0.09
TPM3-205ENST00000328159 KIAA2013Q8IYS2 634 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 FAM9CQ8IZT9 166 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 RNF175Q8N4F7 328 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 KRTCAP2Q8N6L1 136 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 NEIL2Q969S2 332 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 APIPQ96GX9 242 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 TTYH1Q9H313 450 aaPredicted RBP14.47□□□□□ -0.09
TPM3-205ENST00000328159 CLMPQ9H6B4 373 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 SGK2Q9HBY8 427 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 SCML1Q9UN30 329 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 DYRK1BQ9Y463 629 aa14.47□□□□□ -0.09
TPM3-205ENST00000328159 IL6P05231 212 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 RPSAP08865 295 aaKnown RBP14.46□□□□□ -0.09
TPM3-205ENST00000328159 MYCLP1P12525 358 aaPredicted RBP14.46□□□□□ -0.09
TPM3-205ENST00000328159 ACPPP15309 386 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 PCSK2P16519 638 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 NPPBP16860 134 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 AMD1P17707 334 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 POU3F3P20264 500 aaPredicted RBP14.46□□□□□ -0.09
TPM3-205ENST00000328159 IGFBP4P22692 258 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 CLDN8P56748 225 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 MRPS21P82921 87 aaKnown RBP14.46□□□□□ -0.09
TPM3-205ENST00000328159 BNIP2Q12982 314 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 PWP1Q13610 501 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 TSTA3Q13630 321 aaPredicted RBP14.46□□□□□ -0.09
TPM3-205ENST00000328159 FAM174BQ3ZCQ3 159 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 RABL3Q5HYI8 236 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 NANOGP8Q6NSW7 305 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 TLDC1Q6P9B6 456 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 DLEU7Q6UYE1 221 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 DHFR2Q86XF0 187 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 HID1Q8IV36 788 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 KBTBD2Q8IY47 623 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 PQLC1Q8N2U9 271 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 SLC44A3Q8N4M1 653 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 PHC3Q8NDX5 983 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 OR5AR1Q8NGP9 310 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 CLHC1Q8NHS4 586 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 SLC13A3Q8WWT9 602 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 TFGQ92734 400 aaPredicted RBP14.46□□□□□ -0.09
TPM3-205ENST00000328159 DNASE1L2Q92874 299 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 RAD51AP1Q96B01 352 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 NAF1Q96HR8 494 aaKnown RBP14.46□□□□□ -0.09
TPM3-205ENST00000328159 FCRL1Q96LA6 429 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 C1QTNF7Q9BXJ2 289 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 TRIM8Q9BZR9 551 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 NANOGQ9H9S0 305 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 PREBQ9HCU5 417 aa14.46□□□□□ -0.09
TPM3-205ENST00000328159 SPATA6Q9NWH7 488 aaPredicted RBP14.46□□□□□ -0.09
TPM3-205ENST00000328159 C6orf203Q9P0P8 240 aaPredicted RBP14.46□□□□□ -0.09
TPM3-205ENST00000328159 TBC1D3DA0A087WVF3 549 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TBC1D3IA0A087WXS9 549 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TBC1D3EA0A087X179 549 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TBC1D3KA0A087X1G2 549 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TCRBV3S1A0A5B6 114 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 KLHL33A6NCF5 533 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TBC1D3FA6NER0 549 aaPredicted RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 TBC1D3LB9A6J9 549 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 CASQ2O14958 399 aaPredicted RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 TBC1D3HP0C7X1 549 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 HSD3B1P14060 373 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 ACADSP16219 412 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 ATP6V1C1P21283 382 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 KELP23276 732 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 HSD3B2P26439 372 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 IGFALSP35858 605 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 GSK3BP49841 420 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 EEFSECP57772 596 aaKnown RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 RHDQ02161 417 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TAP2Q03519 686 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 DDX39BQ13838 428 aaKnown RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 SPANXN4Q5MJ08 99 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TBC1D3GQ6DHY5 549 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TBC1D3CQ6IPX1 549 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 CYP2R1Q6VVX0 501 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TMPRSS11BQ86T26 416 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 DCUN1D3Q8IWE4 304 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TBC1D3Q8IZP1 549 aaPredicted RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 LMNTD1Q8N9Z9 388 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 ZUFSPQ96AP4 578 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 WDR34Q96EX3 536 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 SIPA1Q96FS4 1042 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 APOLD1Q96LR9 279 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 LRGUKQ96M69 825 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 UHRF1Q96T88 793 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms