RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 SLITRK4Q8IW52 837 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 C4orf33Q8N1A6 199 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 FBXO39Q8N4B4 442 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 LMNTD1Q8N9Z9 388 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 CCDC63Q8NA47 563 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 AGBL5Q8NDL9 886 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 RDH11Q8TC12 318 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 SREK1Q8WXA9 508 aaKnown RBP13.6□□□□□ -0.23
CMTM1-201ENST00000328020 ZUFSPQ96AP4 578 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 CCDC126Q96EE4 140 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 APOPT1Q96IL0 206 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 CCDC74BQ96LY2 380 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 OR2A14Q96R47 310 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 ATG10Q9H0Y0 220 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 SEMA6CQ9H3T2 930 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 SSU72Q9NP77 194 aaKnown RBP13.6□□□□□ -0.23
CMTM1-201ENST00000328020 SPHK1Q9NYA1 384 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 CPSF2Q9P2I0 782 aaKnown RBP13.6□□□□□ -0.23
CMTM1-201ENST00000328020 XPR1Q9UBH6 696 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 DYRK1BQ9Y463 629 aa13.6□□□□□ -0.23
CMTM1-201ENST00000328020 UBXN8O00124 270 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 STK16O75716 305 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 MPSTP25325 297 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 GGT5P36269 586 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 GMPRP36959 345 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 PIK3CGP48736 1102 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 HSD11B2P80365 405 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 CFHR1Q03591 330 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 PRDX1Q06830 199 aaKnown RBP13.59□□□□□ -0.23
CMTM1-201ENST00000328020 FASTKQ14296 549 aaKnown RBP13.59□□□□□ -0.23
CMTM1-201ENST00000328020 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 N4BP2L1Q5TBK1 243 aaPredicted RBP13.59□□□□□ -0.23
CMTM1-201ENST00000328020 SUSD1Q6UWL2 747 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 SH2D5Q6ZV89 423 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 TMPRSS7Q7RTY8 843 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 C17orf64Q86WR6 236 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 SLC22A9Q8IVM8 553 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 BANPQ8N9N5 519 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 OR56A3Q8NH54 315 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 TCTN2Q96GX1 697 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 MAP3K3Q99759 626 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 SGPP1Q9BX95 441 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 PITPNM3Q9BZ71 974 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 TWSG1Q9GZX9 223 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 ZNF768Q9H5H4 540 aaKnown RBP13.59□□□□□ -0.23
CMTM1-201ENST00000328020 PDE7BQ9NP56 450 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 MRPS30Q9NP92 439 aaKnown RBP13.59□□□□□ -0.23
CMTM1-201ENST00000328020 ABCF3Q9NUQ8 709 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 ZNF358Q9NW07 568 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 SOHLH2Q9NX45 425 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 ANKMY1Q9P2S6 941 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 TAC3Q9UHF0 121 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 PTBP2Q9UKA9 531 aaKnown RBP13.59□□□□□ -0.23
CMTM1-201ENST00000328020 SNX7Q9UNH6 387 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 KCNE2Q9Y6J6 123 aa13.59□□□□□ -0.23
CMTM1-201ENST00000328020 CCDC187A0A096LP49 1063 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 KRT87PA6NCN2 255 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 A8MU76 341 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 TARM1B6A8C7 271 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 STX16-NPEPL1H3BU86 382 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 STX16O14662 325 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 MAP2K7O14733 419 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 WDR47O94967 919 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 MYL2P10916 166 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 ATP5F1P24539 256 aaPredicted RBP13.58□□□□□ -0.24
CMTM1-201ENST00000328020 KCNC1P48547 511 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 NAA20P61599 178 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 ASPHQ12797 758 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 TARDBPQ13148 414 aaKnown RBP eCLIP13.58□□□□□ -0.24
CMTM1-201ENST00000328020 PTCHD3Q3KNS1 767 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 ICE2Q659A1 982 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 LCTLQ6UWM7 567 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 ZNF574Q6ZN55 896 aaPredicted RBP13.58□□□□□ -0.24
CMTM1-201ENST00000328020 LRRC70Q7Z2Q7 622 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 ARHGAP22Q7Z5H3 698 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 THOC6Q86W42 341 aaKnown RBP13.58□□□□□ -0.24
CMTM1-201ENST00000328020 KLHDC8AQ8IYD2 350 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 CHCHD4Q8N4Q1 142 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 TBC1D19Q8N5T2 526 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 PPFIBP2Q8ND30 876 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 OR2L3Q8NG85 312 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 OR2A1Q8NGT9 310 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 UBTD2Q8WUN7 234 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 KLHL6Q8WZ60 621 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 N4BP2L2Q92802 583 aaPredicted RBP13.58□□□□□ -0.24
CMTM1-201ENST00000328020 LIN37Q96GY3 246 aaPredicted RBP13.58□□□□□ -0.24
CMTM1-201ENST00000328020 ACAT2Q9BWD1 397 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 CD244Q9BZW8 370 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 CHRNA10Q9GZZ6 450 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 FANCEQ9HB96 536 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 TMBIM4Q9HC24 238 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 DNAJC11Q9NVH1 559 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 TMEM216Q9P0N5 145 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 TMEM9Q9P0T7 183 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 SEMA5BQ9P283 1151 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 OPTCQ9UBM4 332 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 ANGPTL3Q9Y5C1 460 aa13.58□□□□□ -0.24
CMTM1-201ENST00000328020 A0A1W2PPV9 198 aa13.57□□□□□ -0.24
CMTM1-201ENST00000328020 SLC9B1P1A6NJY1 282 aa13.57□□□□□ -0.24
CMTM1-201ENST00000328020 TK2O00142 265 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms