RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PLEKHA6Q9Y2H5 1048 aa7.75□□□□□ -1.17
CIITA-201ENST00000324288 MUSKO15146 869 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 PROM1O43490 865 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ZNF254O75437 659 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 RPP40O75818 363 aaKnown RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 VIPP01282 170 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 CD247P20963 164 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ANO7Q6IWH7 933 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 NIPAL1Q6NVV3 410 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 NUP54Q7Z3B4 507 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 HID1Q8IV36 788 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 SPATA22Q8NHS9 363 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 SLC30A2Q9BRI3 323 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 OAZ3Q9UMX2 235 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 DAPL1A0PJW8 107 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 MAFKO60675 156 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 PEX10O60683 326 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ZNF182P17025 639 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 PTPN9P43378 593 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 MRPS5P82675 430 aaKnown RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 PITPNAQ00169 270 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 YIPF7Q8N8F6 280 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 TMCO6Q96DC7 493 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 SLC5A7Q9GZV3 580 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ELOVL2Q9NXB9 296 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 MAN2B2Q9Y2E5 1009 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 CLCA3PQ9Y6N3 262 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 RHPN2P1A8MT19 583 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 APODP05090 189 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 CSTF2P33240 577 aaKnown RBP eCLIP7.74□□□□□ -1.17
CIITA-201ENST00000324288 TARDBPQ13148 414 aaKnown RBP eCLIP7.74□□□□□ -1.17
CIITA-201ENST00000324288 RIN1Q13671 783 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ZACNQ401N2 412 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 AUTS2Q8WXX7 1259 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 P2RY11Q96G91 374 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 COMMD4Q9H0A8 199 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 SOX17Q9H6I2 414 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 VNN3Q9NY84 501 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 E2F3O00716 465 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 CD48P09326 243 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ILF3Q12906 894 aaKnown RBP eCLIP7.74□□□□□ -1.17
CIITA-201ENST00000324288 LRRC38Q5VT99 294 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 C9orf57Q5W0N0 161 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 RDH11Q8TC12 318 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 DPEP2Q9H4A9 486 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 OR2S2Q9NQN1 319 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 C1orf109Q9NX04 203 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 RIC1Q4ADV7 1423 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 C1orf167Q5SNV9 1468 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 AGAP5A6NIR3 686 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 PPEF2O14830 753 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 KHNYNO15037 678 aaKnown RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 SCELO95171 688 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ANXA4P09525 319 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 ACADVLP49748 655 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 CDK18Q07002 472 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 AIMP2Q13155 320 aaKnown RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 LRP8Q14114 963 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 IFI44LQ53G44 452 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 SDR16C5Q8N3Y7 309 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 C3orf58Q8NDZ4 430 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 OR2AJ1Q8NGZ0 328 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 HEXDCQ8WVB3 486 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 C8orf48Q96LL4 319 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 KREMEN1Q96MU8 473 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 SSX3Q99909 188 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ZNF670Q9BS34 389 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ASPNQ9BXN1 380 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 IPPKQ9H8X2 491 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 MOCS1Q9NZB8 636 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 A0A1B0GVT2 93 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 AGPSO00116 658 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ASLP04424 464 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ZNF8P17098 575 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 HOXB8P17481 243 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 ZNF81P51508 661 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 PIGWQ7Z7B1 504 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 TRPM4Q8TD43 1214 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 MTMR9Q96QG7 549 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 ZNF878C9JN71 531 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 MT-CYBP00156 380 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 ELNP15502 786 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 GLDCP23378 1020 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 SLC6A4P31645 630 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 MATKP42679 507 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 NCBP2P52298 156 aaKnown RBP eCLIP7.74□□□□□ -1.17
CIITA-201ENST00000324288 HSDL1Q3SXM5 330 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 PHPT1Q9NRX4 125 aaPredicted RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 PCDHGB3Q9Y5G1 929 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 CHD2O14647 1828 aaKnown RBP7.74□□□□□ -1.17
CIITA-201ENST00000324288 DIRAS1O95057 198 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 LGI4Q8N135 537 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 GPR151Q8TDV0 419 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 KCTD7Q96MP8 289 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 TTPALQ9BTX7 342 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 KIF26BQ2KJY2 2108 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 OPN1SWP03999 348 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 CBLP22681 906 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 MAPK8P45983 427 aa7.74□□□□□ -1.17
CIITA-201ENST00000324288 NR0B1P51843 470 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms