RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 PDCD4Q53EL6 469 aaKnown RBP17.83■□□□□ 0.45
USP39-201ENST00000323701 FRG2Q64ET8 278 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 SLCO4C1Q6ZQN7 724 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 CHCHD4Q8N4Q1 142 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 FRG2BQ96QU4 278 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 MTERF1Q99551 399 aaKnown RBP17.83■□□□□ 0.45
USP39-201ENST00000323701 IL1RL2Q9HB29 575 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 MRGBPQ9NV56 204 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 CYP8B1Q9UNU6 501 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 DLGAP4Q9Y2H0 992 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 KANSL1LA0AUZ9 987 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 SLC28A1O00337 649 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 KRT36O76013 467 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 PNLIPRP1P54315 467 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 DMPKQ09013 629 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 RCAN2Q14206 197 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 CLCA4Q14CN2 919 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 PIGGQ5H8A4 983 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 C1orf146Q5VVC0 180 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 C16orf89Q6UX73 402 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 NET1Q7Z628 596 aaPredicted RBP17.83■□□□□ 0.44
USP39-201ENST00000323701 FAM160A2Q8N612 972 aaPredicted RBP17.83■□□□□ 0.44
USP39-201ENST00000323701 FAM156AQ8NDB6 213 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 OR5K2Q8NHB8 316 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 WDR20Q8TBZ3 569 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 ASB12Q8WXK4 309 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 OR1E3Q8WZA6 343 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 MSANTD3Q96H12 275 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 PPP3R2Q96LZ3 170 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 TRIM8Q9BZR9 551 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 FOXQ1Q9C009 403 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 SPNS1Q9H2V7 528 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 LRTM1Q9HBL6 345 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 GMPR2Q9P2T1 348 aaKnown RBP17.83■□□□□ 0.44
USP39-201ENST00000323701 MCM8Q9UJA3 840 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 SNX6Q9UNH7 406 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 POMPQ9Y244 141 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 SLCO1B1Q9Y6L6 691 aa17.83■□□□□ 0.44
USP39-201ENST00000323701 A0A0C4DFX4 3053 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 OR52A4PA6NMU1 304 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 CACNB4O00305 520 aaPredicted RBP17.82■□□□□ 0.44
USP39-201ENST00000323701 SEMA4FO95754 770 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 IGHV4-34P06331 123 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 ACTR3P61158 418 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 MEF2AQ02078 507 aaPredicted RBP17.82■□□□□ 0.44
USP39-201ENST00000323701 IMPG1Q17R60 797 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 PAGE3Q5JUK9 113 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 LIPJQ5W064 366 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 CAPN13Q6MZZ7 669 aaPredicted RBP17.82■□□□□ 0.44
USP39-201ENST00000323701 C8orf82Q6P1X6 216 aaPredicted RBP17.82■□□□□ 0.44
USP39-201ENST00000323701 BNC2Q6ZN30 1099 aaPredicted RBP17.82■□□□□ 0.44
USP39-201ENST00000323701 GCNT7Q6ZNI0 430 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 TMPRSS11BQ86T26 416 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 GALNT13Q8IUC8 556 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 SPDL1Q96EA4 605 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 SCARF2Q96GP6 870 aaPredicted RBP17.82■□□□□ 0.44
USP39-201ENST00000323701 APIPQ96GX9 242 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 HHIPQ96QV1 700 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 PRDM8Q9NQV8 689 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 SLAMF8Q9P0V8 285 aa17.82■□□□□ 0.44
USP39-201ENST00000323701 PRSS38A1L453 326 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 SH3BGRLO75368 114 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 EML2O95834 649 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 SLC35G4P0C7Q5 338 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 PSME3P61289 254 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 DDX39BQ13838 428 aaKnown RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 ZNF423Q2M1K9 1284 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 DCUN1D3Q8IWE4 304 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 CLHC1Q8NHS4 586 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 CCL4L1Q8NHW4 92 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 RLN3Q8WXF3 142 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 TSACCQ96A04 125 aaPredicted RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 ACAT2Q9BWD1 397 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 CARS2Q9HA77 564 aaKnown RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 C1orf109Q9NX04 203 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 NOP53Q9NZM5 478 aaKnown RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 SCHIP1Q9P0W5 487 aaPredicted RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 FXYD1O00168 92 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 MAN2B1O00754 1011 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 ETHE1O95571 254 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 XRCC1P18887 633 aaPredicted RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 GNAZP19086 355 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 TACR1P25103 407 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 CCR3P51677 355 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 POLR2JP52435 117 aaKnown RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 MLLT1Q03111 559 aaPredicted RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 PCDH1Q08174 1060 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 SF1Q15637 639 aaKnown RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 TIGD2Q4W5G0 525 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 ENPP7Q6UWV6 458 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 SYT13Q7L8C5 426 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 RD3Q7Z3Z2 195 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 ZFAND4Q86XD8 727 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 LIX1Q8N485 282 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 KRTCAP2Q8N6L1 136 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 RAD51AP1Q96B01 352 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 TOE1Q96GM8 510 aaKnown RBP17.81■□□□□ 0.44
USP39-201ENST00000323701 C12orf66Q96MD2 445 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 TIMM29Q9BSF4 260 aa17.81■□□□□ 0.44
USP39-201ENST00000323701 KCNE2Q9Y6J6 123 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms