RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SEC14L2O76054 403 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 CCL14Q16627 93 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 C18orf21Q32NC0 220 aaPredicted RBP12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 IFI44LQ53G44 452 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 ZNF57Q68EA5 555 aaPredicted RBP12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 THOC7Q6I9Y2 204 aaKnown RBP12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 DPP10Q8N608 796 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 BRI3BPQ8WY22 251 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 DUSP26Q9BV47 211 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 MIR1-1HGQ9H1L0 117 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 CRISPLD1Q9H336 500 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 RUVBL1Q9Y265 456 aaKnown RBP12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 LOC285095A0A1B0GVY8 99 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 MROH6A6NGR9 719 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 HAS3O00219 553 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 EPORP19235 508 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 PPP2R1BP30154 601 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 NSG1P42857 185 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 SLC15A1P46059 708 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 EPHB3P54753 998 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 EMP3P54852 163 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 FCGRTP55899 365 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 DSC3Q14574 896 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 DHRS4L2Q6PKH6 230 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 SNX29P2Q8IUI4 249 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 TMEM151AQ8N4L1 468 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 ARRDC2Q8TBH0 407 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 DMRTB1Q96MA1 342 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 EHD1Q9H4M9 534 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 ITM2CQ9NQX7 267 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 TOR4AQ9NXH8 423 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 AHSPQ9NZD4 102 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 ADAM30Q9UKF2 790 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 INTS6Q9UL03 887 aaKnown RBP12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 LRRC37AA6NMS7 1700 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 TMX2-CTNND1H3BSU7 103 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 RETP07949 1114 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 PABPC1P11940 636 aaKnown RBP12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 OR1D2P34982 312 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 RPP38P78345 283 aaKnown RBP12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 EMX1Q04741 257 aaPredicted RBP12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 DUOXA1Q1HG43 343 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 FBXO43Q4G163 708 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 TBPL2Q6SJ96 375 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 KLHL17Q6TDP4 642 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 PPCDCQ96CD2 204 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 TEX37Q96LM6 180 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 BRINP2Q9C0B6 783 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 HEBP1Q9NRV9 189 aa12.43□□□□□ -0.42
DNMT3A-202ENST00000321117 KRT87PA6NCN2 255 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 WASH4PA8MWX3 477 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 WNT9AO14904 365 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 SGTAO43765 313 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 HTR1BP28222 390 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 GTF2E2P29084 291 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 CLCN4P51793 760 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 UGT2B15P54855 530 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 POLR2LP62875 67 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 SCN1BQ07699 218 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 SMARCB1Q12824 385 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 NAE1Q13564 534 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 GCNT6Q5T4J0 391 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 MZT2BQ6NZ67 158 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 NEK5Q6P3R8 708 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 LUZP2Q86TE4 346 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 DDX53Q86TM3 631 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 CLIP4Q8N3C7 705 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 CNPPD1Q9BV87 410 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 PRRG3Q9BZD7 231 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 HDHD2Q9H0R4 259 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 GORASP2Q9H8Y8 452 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 VPS51Q9UID3 782 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 RIMKLBQ9ULI2 386 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 TALDO1P37837 337 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 RPL3P39023 403 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 MAGEA10P43363 369 aaPredicted RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 FRG2Q64ET8 278 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 PLET1Q6UQ28 207 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 LGI4Q8N135 537 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 FRG2BQ96QU4 278 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 ZNFX1Q9P2E3 1918 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 SIPA1L1O43166 1804 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 FADS2P1A8MWK0 482 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 I6L893 689 aaPredicted RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 KDELR3O43731 214 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 TNFRSF21O75509 655 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 OPN1SWP03999 348 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 ATXN1LP0C7T5 689 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 JUNBP17275 347 aaPredicted RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 PTX3P26022 381 aaPredicted RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 HNF4AP41235 474 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 SEMG2Q02383 582 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 ZNF45Q02386 682 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 PIANPQ8IYJ0 282 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 GPR65Q8IYL9 337 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 CD200R1Q8TD46 325 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 NETO1Q8TDF5 533 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 SLC22A17Q8WUG5 538 aa12.42□□□□□ -0.42
DNMT3A-202ENST00000321117 COL21A1Q96P44 957 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms