RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SEC22BO75396 215 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 PDE5AO76074 875 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 NPPBP16860 134 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 CD22P20273 847 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 DPP6P42658 865 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 DGKEP52429 567 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 NME5P56597 212 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 TBPL1P62380 186 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 RPL38P63173 70 aaKnown RBP17.28■□□□□ 0.36
RAB39A-201ENST00000320578 HMGCS1Q01581 520 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 TLR1Q15399 786 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 CYP2A13Q16696 494 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 ATG9BQ674R7 924 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 ZNF852Q6ZMS4 543 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 DPP10Q8N608 796 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 REPS1Q96D71 796 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 TEX37Q96LM6 180 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 HBEGFQ99075 208 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 EFCAB11Q9BUY7 163 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 ACTL8Q9H568 366 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 DYRK1BQ9Y463 629 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 KANSL1LA0AUZ9 987 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 PRR23AA6NEV1 266 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 CCDC154A6NI56 674 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 FPGTO14772 594 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 CFLARO15519 480 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 APBB3O95704 486 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 FUCA1P04066 466 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 SLC35G4P0C7Q5 338 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 PRKCQQ04759 706 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 LAPTM5Q13571 262 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 CEACAM7Q14002 265 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 PUS10Q3MIT2 529 aaKnown RBP17.28■□□□□ 0.36
RAB39A-201ENST00000320578 SGO1Q5FBB7 561 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 SAMD4BQ5PRF9 694 aaKnown RBP17.28■□□□□ 0.36
RAB39A-201ENST00000320578 LCTLQ6UWM7 567 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 ZNF687Q8N1G0 1237 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 HAUS8Q9BT25 410 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 PCBD2Q9H0N5 130 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 TRIT1Q9H3H1 467 aaKnown RBP17.28■□□□□ 0.36
RAB39A-201ENST00000320578 CCDC177Q9NQR7 707 aaPredicted RBP17.28■□□□□ 0.36
RAB39A-201ENST00000320578 TM7SF3Q9NS93 570 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 SPATA6Q9NWH7 488 aaPredicted RBP17.28■□□□□ 0.36
RAB39A-201ENST00000320578 ABCD2Q9UBJ2 740 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 SUCOQ9UBS9 1254 aaKnown RBP17.28■□□□□ 0.36
RAB39A-201ENST00000320578 NKX1-2Q9UD57 310 aaPredicted RBP17.28■□□□□ 0.36
RAB39A-201ENST00000320578 DUSP12Q9UNI6 340 aa17.28■□□□□ 0.36
RAB39A-201ENST00000320578 POLR3HQ9Y535 204 aaPredicted RBP17.28■□□□□ 0.36
RAB39A-201ENST00000320578 SLC31A1O15431 190 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 LATO43561 262 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 CHRNB1P11230 501 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 HNRNPA2B1P22626 353 aaKnown RBP17.27■□□□□ 0.36
RAB39A-201ENST00000320578 IL12AP29459 219 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 CLCNKAP51800 687 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 THOP1P52888 689 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 SKIV2LQ15477 1246 aaKnown RBP17.27■□□□□ 0.36
RAB39A-201ENST00000320578 USP39Q53GS9 565 aaKnown RBP17.27■□□□□ 0.36
RAB39A-201ENST00000320578 PAGE2BQ5JRK9 111 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 SPDYE1Q8NFV5 336 aaPredicted RBP17.27■□□□□ 0.36
RAB39A-201ENST00000320578 ZBTB18Q99592 522 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 CD300AQ9UGN4 299 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 HS3ST3A1Q9Y663 406 aa17.27■□□□□ 0.36
RAB39A-201ENST00000320578 SOX1O00570 391 aaPredicted RBP17.26■□□□□ 0.35
RAB39A-201ENST00000320578 TNFRSF10CO14798 259 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 C1GALT1C1LP0DN25 315 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 VARSP26640 1264 aaKnown RBP17.26■□□□□ 0.35
RAB39A-201ENST00000320578 MAT2AP31153 395 aaKnown RBP17.26■□□□□ 0.35
RAB39A-201ENST00000320578 ACSL1P33121 698 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 YPEL5P62699 121 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 TRAP1Q12931 704 aaKnown RBP17.26■□□□□ 0.35
RAB39A-201ENST00000320578 NFATC4Q14934 902 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 SYT13Q7L8C5 426 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 CHST15Q7LFX5 561 aaPredicted RBP17.26■□□□□ 0.35
RAB39A-201ENST00000320578 PPFIBP2Q8ND30 876 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 OR5AR1Q8NGP9 310 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 NEIL2Q969S2 332 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 STOML1Q9UBI4 398 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 SUFUQ9UMX1 484 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 FOXE1O00358 373 aaPredicted RBP17.26■□□□□ 0.35
RAB39A-201ENST00000320578 KRT36O76013 467 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 BCKDHAP12694 445 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 ACP5P13686 325 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 AMD1P17707 334 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 IDSP22304 550 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 NUDT1P36639 197 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 CCR5P51681 352 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 NEK2P51955 445 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 CLDN8P56748 225 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 AP2B1P63010 937 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 CCNIQ14094 377 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 LRRC32Q14392 662 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 RCN1Q15293 331 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 CCDC85BQ15834 202 aaPredicted RBP17.26■□□□□ 0.35
RAB39A-201ENST00000320578 MED27Q6P2C8 311 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 NXPE4Q6UWF7 544 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 FAM124AQ86V42 546 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 LAS2Q8IYD9 372 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 SLC5A11Q8WWX8 675 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 UBE2E3Q969T4 207 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 LRRC58Q96CX6 371 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms