RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 KIAA1958Q8N8K9 716 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 GOLM1Q8NBJ4 401 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 OR8J3Q8NGG0 315 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 ATL1Q8WXF7 558 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 BIRC7Q96CA5 298 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 AURKBQ96GD4 344 aaPredicted RBP7.35□□□□□ -1.23
IFT88-201ENST00000319980 ZNF597Q96LX8 424 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 NSMCE2Q96MF7 247 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 ZNF583Q96ND8 569 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 SAMD11Q96NU1 681 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 OR4K3Q96R72 315 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 TBCDQ9BTW9 1192 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 EBPLQ9BY08 206 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 IKZF5Q9H5V7 419 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 SLC6A13Q9NSD5 602 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 ASIC5Q9NY37 505 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 SLC25A37Q9NYZ2 338 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 GDE1Q9NZC3 331 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 ATXN10Q9UBB4 475 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 ANAPC2Q9UJX6 822 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 NEUROG3Q9Y4Z2 214 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 ARHGAP10A1A4S6 786 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 MAP3K13O43283 966 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 GSNP06396 782 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 PRPS2P11908 318 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 IMPA1P29218 277 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 S100A3P33764 101 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 GJA4P35212 333 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 WASP42768 502 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 RUNX3Q13761 415 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 PDGFRLQ15198 375 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 IRAK1BP1Q5VVH5 260 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 LIPJQ5W064 366 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 ADNP2Q6IQ32 1131 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 NOXRED1Q6NXP6 359 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 CRTC3Q6UUV7 619 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 VITQ6UXI7 678 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 ERN2Q76MJ5 926 aaKnown RBP7.34□□□□□ -1.23
IFT88-201ENST00000319980 SYTL1Q8IYJ3 562 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 PHACTR4Q8IZ21 702 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 ANKFN1Q8N957 763 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 LMNTD1Q8N9Z9 388 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 OR2T12Q8NG77 320 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 FIG4Q92562 907 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 CMTM7Q96FZ5 175 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 RNF145Q96MT1 663 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 GBP5Q96PP8 586 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 ZCCHC2Q9C0B9 1178 aaKnown RBP7.34□□□□□ -1.23
IFT88-201ENST00000319980 YIPF3Q9GZM5 350 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 TRIM39Q9HCM9 518 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 OAZ3Q9UMX2 235 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 PRKAB1Q9Y478 270 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 PCDHB3Q9Y5E6 796 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 PLXNB3Q9ULL4 1909 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 MYO9BQ13459 2157 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 NPC1O15118 1278 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 GMNNO75496 209 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 POP7O75817 140 aaKnown RBP7.34□□□□□ -1.23
IFT88-201ENST00000319980 C1orf105O95561 183 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 AMD1P17707 334 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 FCARP24071 287 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 OPRD1P41143 372 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 P2RY2P41231 377 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 CYP4F3Q08477 520 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 SF1Q15637 639 aaKnown RBP7.34□□□□□ -1.23
IFT88-201ENST00000319980 PPP4R4Q6NUP7 873 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 GCNT7Q6ZNI0 430 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 ZNF547Q8IVP9 402 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 MSRB3Q8IXL7 192 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 SPDYE1Q8NFV5 336 aaPredicted RBP7.34□□□□□ -1.23
IFT88-201ENST00000319980 CENPNQ96H22 339 aaPredicted RBP7.34□□□□□ -1.23
IFT88-201ENST00000319980 CENPKQ9BS16 269 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 CHID1Q9BWS9 393 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 PBX4Q9BYU1 374 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 EPHX3Q9H6B9 360 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 PRSS16Q9NQE7 514 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 VPS29Q9UBQ0 182 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 MAGEL2Q9UJ55 1249 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 INVSQ9Y283 1065 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 TMEM98Q9Y2Y6 226 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 PCDHB14Q9Y5E9 798 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 KCNE2Q9Y6J6 123 aa7.34□□□□□ -1.23
IFT88-201ENST00000319980 MAGEB17A8MXT2 336 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 H0YJX3 145 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 RFXAPO00287 272 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 GSTA4O15217 222 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 UGDHO60701 494 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 KAT7O95251 611 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 PGM3O95394 542 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 UMPSP11172 480 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 ZNF8P17098 575 aaPredicted RBP7.33□□□□□ -1.24
IFT88-201ENST00000319980 MAPK1P28482 360 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 CCT8P50990 548 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 PLOD1Q02809 727 aaPredicted RBP7.33□□□□□ -1.24
IFT88-201ENST00000319980 CNTN1Q12860 1018 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 NFE2L1Q14494 772 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 STARD3Q14849 445 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 FXNQ16595 210 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 FOXB2Q5VYV0 432 aa7.33□□□□□ -1.24
IFT88-201ENST00000319980 CHRDL2Q6WN34 429 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms