RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 FAM86B1Q8N7N1 296 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 PROKR1Q8TCW9 393 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 FAR1Q8WVX9 515 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 ULK4Q96C45 1275 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 MAGEE1Q9HCI5 957 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 FBXO8Q9NRD0 319 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 REV3LO60673 3130 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 A0A1W2PP18 115 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 STX16O14662 325 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 HLA-FP30511 346 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 ZFP36L2P47974 494 aaKnown RBP15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 NEK2P51955 445 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 SELPLGQ14242 412 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 ATP13A5Q4VNC0 1218 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 TXNDC11Q6PKC3 985 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 RBFAQ8N0V3 343 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 CHST14Q8NCH0 376 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 OSCP1Q8WVF1 389 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 TRMT2BQ96GJ1 504 aaKnown RBP15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 TBCDQ9BTW9 1192 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 SLC46A2Q9BY10 475 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 ITM2CQ9NQX7 267 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 FBXO10Q9UK96 956 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 PNMA8BQ9ULN7 279 aaPredicted RBP15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 USP34Q70CQ2 3546 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 RAD51BO15315 384 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 AKT1P31749 480 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 RGS4P49798 205 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 TPD52P55327 224 aaPredicted RBP15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 NDUFA5Q16718 116 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 PAGE2Q7Z2X7 111 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 ADAMTSL2Q86TH1 951 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 GALNT13Q8IUC8 556 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 LEMD2Q8NC56 503 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 SCAMP4Q969E2 229 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 NODALQ96S42 347 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 INVSQ9Y283 1065 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 ANAPC1Q9H1A4 1944 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 TAPBPO15533 448 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 GABARAPO95166 117 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 CXCL14O95715 111 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 IGSF6O95976 241 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 PRKACGP22612 351 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 SERPINB1P30740 379 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 CCR2P41597 374 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 AP1S1P61966 158 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 ERVK-8P63133 956 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 UBE2UQ5VVX9 321 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 GLYATQ6IB77 296 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 CNKSR3Q6P9H4 555 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 DPY19L3Q6ZPD9 716 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 ADCK1Q86TW2 530 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 STK40Q8N2I9 435 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 RNF175Q8N4F7 328 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 KRTCAP2Q8N6L1 136 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 BEND7Q8N7W2 519 aaPredicted RBP15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 RPL3LQ92901 407 aaKnown RBP15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 FAM126AQ9BYI3 521 aaPredicted RBP15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 LINC00597Q9H2U6 94 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 OPTCQ9UBM4 332 aa15.15■□□□□ 0.02
SHROOM1-201ENST00000319854 C16orf96A6NNT2 1141 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 ZNF99A8MXY4 864 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 LEFTY2O00292 366 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 FGF18O76093 207 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 UMPSP11172 480 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 SERPINA4P29622 427 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 CLCN4P51793 760 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 CRTC1Q6UUV9 634 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 CYP20A1Q6UW02 462 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 SNX20Q7Z614 316 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 TCEAL8Q8IYN2 117 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 ZBTB2Q8N680 514 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 PIK3C3Q8NEB9 887 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 OR10Q1Q8NGQ4 319 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 LILRB4Q8NHJ6 448 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 CNIH3Q8TBE1 160 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 DYNC2LI1Q8TCX1 351 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 TP53INP1Q96A56 240 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 ARL15Q9NXU5 204 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 LOC730098B7Z3J9 87 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 EIF3FO00303 357 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 SLC1A7O00341 560 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 SNPHO15079 494 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 ZNF821O75541 412 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 EFEMP2O95967 443 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 B3GALT4O96024 378 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 ITIH1P19827 911 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 CD6P30203 668 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 KCNAB2Q13303 367 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 RCAN2Q14206 197 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 FAM209AQ5JX71 171 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 PSD4Q8NDX1 1056 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 OR2AP1Q8NGE2 309 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 CDC26Q8NHZ8 85 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 CYB5D2Q8WUJ1 264 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 TXNDC15Q96J42 360 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 TRIM54Q9BYV2 358 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 PAK6Q9NQU5 681 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 SEC22BO75396 215 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms