RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 UBE2R2Q712K3 238 aaPredicted RBP28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 SYVN1Q86TM6 617 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 MYO1HQ8N1T3 1032 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 OR2L3Q8NG85 312 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 DLG3Q92796 817 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 C16orf45Q96MC5 204 aaPredicted RBP28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 NLNQ9BYT8 704 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 SPRTNQ9H040 489 aaPredicted RBP28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 AKIRIN1Q9H9L7 192 aaPredicted RBP28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 PCMTD2Q9NV79 361 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 KLHL20Q9Y2M5 609 aa28.04■■■□□ 2.08
SYNGR1-202ENST00000318801 COL6A6A6NMZ7 2263 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 E7ESA3 106 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 EIF3HO15372 352 aaKnown RBP eCLIP28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 CCNDBP1O95273 360 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 PRB1P04280 392 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 FAM87AP0C7U9 286 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 RORAP35398 523 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 PNLIPRP1P54315 467 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 ARSFP54793 590 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 MRPS25P82663 173 aaKnown RBP28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 EEF1AKMT2Q5JPI9 291 aaKnown RBP28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 GPATCH11Q8N954 259 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 OR2A1Q8NGT9 310 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 PROKR1Q8TCW9 393 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 PKP4Q99569 1192 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 PADI2Q9Y2J8 665 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 VWA7Q9Y334 891 aa28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 SMG1Q96Q15 3661 aaKnown RBP28.03■■■□□ 2.08
SYNGR1-202ENST00000318801 SRPX2O60687 465 aaPredicted RBP28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 C8GP07360 202 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 GABRB3P28472 473 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 GRIA3P42263 894 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 GABRA4P48169 554 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 IL2P60568 153 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 CBLBQ13191 982 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 RHBDD2Q6NTF9 364 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 TRMT10BQ6PF06 316 aaKnown RBP28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 CYHR1Q6ZMK1 362 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 ZNF655Q8N720 491 aaPredicted RBP28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 EEF1AKMT1Q8WVE0 214 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 GEMIN8Q9NWZ8 242 aaKnown RBP28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 GPN3Q9UHW5 284 aaPredicted RBP28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 CDC23Q9UJX2 597 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 SNX7Q9UNH6 387 aa28.02■■■□□ 2.08
SYNGR1-202ENST00000318801 CDC14CA4D256 554 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 TP73O15350 636 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 SLC16A8O95907 504 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 TUBB4AP04350 444 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 HIST1H2AGP0C0S8 130 aaPredicted RBP28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 ERGP11308 486 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 HIST1H2ADP20671 130 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 DUPD1Q68J44 220 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 FAM45BPQ6NSW5 357 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 EXD3Q8N9H8 876 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 FAM45AQ8TCE6 357 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 THAP4Q8WY91 577 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 HIST1H2AHQ96KK5 128 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 HIST1H2AJQ99878 128 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 SELENOSQ9BQE4 189 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 H2AFJQ9BTM1 129 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 ACAT2Q9BWD1 397 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 MRPS30Q9NP92 439 aaKnown RBP28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 TUBD1Q9UJT1 453 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 KLK4Q9Y5K2 254 aa28.01■■■□□ 2.07
SYNGR1-202ENST00000318801 KRT87PA6NCN2 255 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 URI1O94763 535 aaPredicted RBP28■■■□□ 2.07
SYNGR1-202ENST00000318801 POLE2P56282 527 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 DCDP81605 110 aaKnown RBP28■■■□□ 2.07
SYNGR1-202ENST00000318801 FASTKQ14296 549 aaKnown RBP28■■■□□ 2.07
SYNGR1-202ENST00000318801 GRM7Q14831 915 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 PTCHD3Q3KNS1 767 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 THEMIS2Q5TEJ8 643 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 YOD1Q5VVQ6 348 aaPredicted RBP28■■■□□ 2.07
SYNGR1-202ENST00000318801 FCRL6Q6DN72 434 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 PAQR3Q6TCH7 311 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 PIWIL4Q7Z3Z4 852 aaKnown RBP28■■■□□ 2.07
SYNGR1-202ENST00000318801 SLC26A11Q86WA9 606 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 ZNF843Q8N446 348 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 CDKL2Q92772 493 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 DHRS4Q9BTZ2 278 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 TRIM54Q9BYV2 358 aa28■■■□□ 2.07
SYNGR1-202ENST00000318801 SLC16A5O15375 505 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 ALAS2P22557 587 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 PSMB5P28074 263 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 CDKN2DP55273 166 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 SP140Q13342 867 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 FAM214AQ32MH5 1076 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 RBM20Q5T481 1227 aaKnown RBP27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 HECTD2Q5U5R9 776 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 SUSD1Q6UWL2 747 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 ZNF572Q7Z3I7 529 aaPredicted RBP27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 ENDOVQ8N8Q3 282 aaKnown RBP27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 TTC29Q8NA56 475 aaPredicted RBP27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 ZNF480Q8WV37 535 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 CCDC138Q96M89 665 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 DPH7Q9BTV6 452 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 PARVBQ9HBI1 364 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 PLAC1Q9HBJ0 212 aa27.99■■■□□ 2.07
SYNGR1-202ENST00000318801 SAYSD1Q9NPB0 183 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms