RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TSEN34Q9BSV6 310 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 RANGRFQ9HD47 186 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 PRM3Q9NNZ6 103 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 RAD18Q9NS91 495 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 MIOSQ9NXC5 875 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CARD8Q9Y2G2 431 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 BRCA2P51587 3418 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF236Q9UL36 1845 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 AREL1O15033 823 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 B3GAT3O94766 335 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 PTHP01270 115 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 MLLT6P55198 1093 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 NPRL3Q12980 569 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 FADDQ13158 208 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CAMK2GQ13555 558 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 IRF3Q14653 427 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 MED22Q15528 200 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 Q5BKY6 102 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ARMCX4Q5H9R4 360 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 BRMS1LQ5PSV4 323 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 NKAPQ8N5F7 415 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 OR6J1Q8NGC5 347 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 OR52J3Q8NH60 311 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF675Q8TD23 568 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 UTP15Q8TED0 518 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 UBASH3BQ8TF42 649 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 IGSF8Q969P0 613 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ST6GAL2Q96JF0 529 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 RERGLQ9H628 205 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 RPRD1BQ9NQG5 326 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 OSER1Q9NX31 292 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 NDRG4Q9ULP0 352 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 LOC285095A0A1B0GVY8 99 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 GOLGA8CPA6NN73 597 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CENPBD1B2RD01 187 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 H3BQ06 376 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 MEN1O00255 615 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TREHO43280 583 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 KIAA0513O60268 411 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ICMTO60725 284 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 NBNO60934 754 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CPNE3O75131 537 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 RETP07949 1114 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 SMIM10L2AP0DMW4 78 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 SMIM10L2BP0DMW5 78 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 IFI30P13284 250 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 PKMP14618 531 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 HOXC13P31276 330 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TGM4P49221 684 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 KEAP1Q14145 624 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 PROX2Q3B8N5 592 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ZC3H12BQ5HYM0 836 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ARTNQ5T4W7 220 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 PDE12Q6L8Q7 609 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF551Q7Z340 670 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 SNX20Q7Z614 316 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 SCD5Q86SK9 330 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TSPYL5Q86VY4 417 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 APOBEC3FQ8IUX4 373 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TRIM48Q8IWZ4 208 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 UBQLNLQ8IYU4 475 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CFAP52Q8N1V2 620 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CD200R1Q8TD46 325 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 PDLIM5Q96HC4 596 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 RPRD1AQ96P16 312 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 SDHCQ99643 169 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TIGARQ9NQ88 270 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 THUMPD1Q9NXG2 353 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 NUFIP1Q9UHK0 495 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 RAPGEFL1Q9UHV5 662 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TBC1D24Q9ULP9 559 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 KLHL20Q9Y2M5 609 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 MAU2Q9Y6X3 613 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 F8W810 466 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 SEMA3DO95025 777 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 GNRH1P01148 92 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 IGLV3-25P01717 112 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 CSF2P04141 144 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 MMP3P08254 477 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 SERPINF2P08697 491 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 SMPD1P17405 629 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 OGNP20774 298 aaKnown RBP9.4□□□□□ -0.9
PTPRA-202ENST00000318266 PCSK1P29120 753 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 NRIP1P48552 1158 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 GNG2P59768 71 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 EFEMP1Q12805 493 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 DMC1Q14565 340 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 CPSF6Q16630 551 aaKnown RBP eCLIP9.4□□□□□ -0.9
PTPRA-202ENST00000318266 CACHD1Q5VU97 1274 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 SLX4IPQ5VYV7 408 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 TTC23LQ6PF05 361 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 RGL4Q8IZJ4 473 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 STX19Q8N4C7 294 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 KBTBD8Q8NFY9 601 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 SH3GL1Q99961 368 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 RTP3Q9BQQ7 232 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 POLR1EQ9GZS1 481 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms