RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 H3BM21 787 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 FPGTO14772 594 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SEPT4O43236 478 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SCO1O75880 301 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 CDRT1O95170 752 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 CAPNS1P04632 268 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 KIR3DL1P43629 444 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SELENBP1Q13228 472 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 CDK5R2Q13319 367 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 GTF2H2Q13888 395 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SEMA3AQ14563 771 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 KLHL12Q53G59 568 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 OR2T5Q6IEZ7 315 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 GTF2H2CQ6P1K8 395 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 MSANTD2Q6P1R3 559 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 NRARPQ7Z6K4 114 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 C2orf73Q8N5S3 287 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 MFSD2AQ8NA29 543 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ARRDC4Q8NCT1 418 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 OR2T29Q8NH02 315 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SLC22A17Q8WUG5 538 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SLC30A2Q9BRI3 323 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 WACQ9BTA9 647 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 TTPALQ9BTX7 342 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 KIFC1Q9BW19 673 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 WBP1LQ9NX94 342 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 DNAJC27Q9NZQ0 273 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 RABL2AQ9UBK7 228 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 RPS6KA6Q9UK32 745 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 IFT52Q9Y366 437 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 COL2A1P02458 1487 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 NINQ8N4C6 2090 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ASCC3Q8N3C0 2202 aaKnown RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 H0YJX3 145 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 SMLR1H3BR10 107 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 UBFD1O14562 309 aaKnown RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 KIAA0513O60268 411 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 PRLP01236 227 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 GBAP04062 536 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 PGRP06401 933 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 MMP3P08254 477 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 PFKLP17858 780 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 EPORP19235 508 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 EN2P19622 333 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 TYMPP19971 482 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 CD52P31358 61 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 GRM5P41594 1212 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 CASP3P42574 277 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 LHX1P48742 406 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 ZNF135P52742 658 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 MLLT10P55197 1068 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 RPP38P78345 283 aaKnown RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 ST3GAL4Q11206 333 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 ZNF177Q13360 481 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 DSC3Q14574 896 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 HIST2H2ACQ16777 129 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 SIRPB2Q5JXA9 342 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 MZT2BQ6NZ67 158 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 DCLRE1AQ6PJP8 1040 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 VN1R5Q7Z5H4 357 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 HMGN2P46Q86SG4 172 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 CILP2Q8IUL8 1156 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 MINDY2Q8NBR6 621 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 TRPV1Q8NER1 839 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 PMEPA1Q969W9 287 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 COPS8Q99627 209 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 TUBA1CQ9BQE3 449 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 MROQ9BYG7 248 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 RANGRFQ9HD47 186 aaPredicted RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 IGSF5Q9NSI5 407 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 THUMPD1Q9NXG2 353 aaKnown RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 VAPAQ9P0L0 249 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 GJD2Q9UKL4 321 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 INTS6Q9UL03 887 aaKnown RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 SAMD4AQ9UPU9 718 aaKnown RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 FAM92AA1XBS5 289 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 TEX46H3BTG2 121 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 TLL1O43897 1013 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 RPP40O75818 363 aaKnown RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 UPK1BO75841 260 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 IL6P05231 212 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 ACRP10323 421 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 ITGALP20701 1170 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 GPC1P35052 558 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 DCTP40126 519 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 PBX3P40426 434 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 CLDN10P78369 228 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 GHRHRQ02643 423 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 OXA1LQ15070 435 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 WSCD2Q2TBF2 565 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 LRRC73Q5JTD7 316 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 CXorf57Q6NSI4 855 aaKnown RBP7.35□□□□□ -1.23
CDHR3-201ENST00000317716 TAPT1Q6NXT6 567 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 C11orf88Q6PI97 169 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 DPY19L3Q6ZPD9 716 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 CHMP1BQ7LBR1 199 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 ISCA2Q86U28 154 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 METTL4Q8N3J2 472 aa7.35□□□□□ -1.23
CDHR3-201ENST00000317716 SVOPLQ8N434 492 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms