RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 C19orf57Q0VDD7 668 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF234Q14588 700 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 PDGFRLQ15198 375 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 INTS11Q5TA45 600 aaKnown RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 PTCRAQ6ISU1 281 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 CCDC81Q6ZN84 652 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 PLEKHG7Q6ZR37 379 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 ZBTB49Q6ZSB9 765 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 TECPR1Q7Z6L1 1165 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 GPSM1Q86YR5 675 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 ZBTB2Q8N680 514 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 ABHD11Q8NFV4 315 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 HMGCLL1Q8TB92 370 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 RPP25Q9BUL9 199 aaKnown RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 LATS2Q9NRM7 1088 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 CLEC1BQ9P126 229 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 RABL2AQ9UBK7 228 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 SYCE1LA8MT33 242 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 MTX2O75431 263 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 CYP2A6P11509 494 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 OPRL1P41146 370 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 NSG1P42857 185 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 HSPA14Q0VDF9 509 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 ARHGEF7Q14155 803 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 HNRNPA1L2Q32P51 320 aaKnown RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 INAVAQ3KP66 663 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 C6orf10Q5SRN2 563 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 HENMT1Q5T8I9 393 aaKnown RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 ATAD3BQ5T9A4 648 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 KANK2Q63ZY3 851 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 KCTD8Q6ZWB6 473 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 CHSY3Q70JA7 882 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 LACC1Q8IV20 430 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 TP53INP1Q96A56 240 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 LRIG1Q96JA1 1093 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 FAM129BQ96TA1 746 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 COPS8Q99627 209 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 NAA50Q9GZZ1 169 aaKnown RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 TMEM245Q9H330 911 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 TUBB1Q9H4B7 451 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 RAD21L1Q9H4I0 556 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 SP140LQ9H930 580 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 ZFP14Q9HCL3 533 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 MID1IP1Q9NPA3 183 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 SEMA4BQ9NPR2 832 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 PKD2L2Q9NZM6 624 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 EIF2B4Q9UI10 523 aaKnown RBP12.72□□□□□ -0.37
CPNE1-201ENST00000317677 DNAJC15Q9Y5T4 150 aa12.72□□□□□ -0.37
CPNE1-201ENST00000317677 TRPC5OSA6NMA1 111 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 H3BQ06 376 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-201ENST00000317677 E2F3O00716 465 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 MTRF1O75570 445 aaKnown RBP12.71□□□□□ -0.37
CPNE1-201ENST00000317677 FGF4P08620 206 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 PRKACBP22694 351 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 CCR7P32248 378 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 GJA4P35212 333 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 MLLT10P55197 1068 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 DCDC1P59894 354 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 ST8SIA6P61647 398 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 TRIM25Q14258 630 aaKnown RBP12.71□□□□□ -0.37
CPNE1-201ENST00000317677 SLC36A3Q495N2 470 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF648Q5T619 568 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-201ENST00000317677 ANKS6Q68DC2 871 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 NXNQ6DKJ4 435 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 SERPINA13PQ6UXR4 307 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 LIPIQ6XZB0 460 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 RAB44Q7Z6P3 723 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-201ENST00000317677 SYVN1Q86TM6 617 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 AKAP14Q86UN6 197 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 CAPSLQ8WWF8 208 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 LRTOMTQ8WZ04 291 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 FGF14Q92915 247 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 ZUFSPQ96AP4 578 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 ERLEC1Q96DZ1 483 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 ACOX2Q99424 681 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 KXD1Q9BQD3 176 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 RIOK2Q9BVS4 552 aaKnown RBP12.71□□□□□ -0.37
CPNE1-201ENST00000317677 OR2B2Q9GZK3 357 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 S1PR5Q9H228 398 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 EFCAB1Q9HAE3 211 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 SMOXQ9NWM0 555 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 CD274Q9NZQ7 290 aa12.71□□□□□ -0.37
CPNE1-201ENST00000317677 NFKBIL1Q9UBC1 381 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-201ENST00000317677 COPG1Q9Y678 874 aaKnown RBP12.71□□□□□ -0.37
CPNE1-201ENST00000317677 TCRBV3S1A0A5B6 114 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 KPNA3O00505 521 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-201ENST00000317677 TAPBPO15533 448 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 FKBP9O95302 570 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 IL12RB1P42701 662 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 HLCSP50747 726 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 GNG2P59768 71 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 LCP2Q13094 533 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 ADAM15Q13444 863 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 RUNX3Q13761 415 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 SELPLGQ14242 412 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 GBX1Q14549 363 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 ZDHHC20Q5W0Z9 365 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 PARM1Q6UWI2 310 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 DET1Q7L5Y6 550 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms