RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TRPM6Q9BX84 2022 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 AREL1O15033 823 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 AXIN1O15169 862 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 HOXC11O43248 304 aaPredicted RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 SEC24DO94855 1032 aaPredicted RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 SOD1P00441 154 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 FTH1P02794 183 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 SRPRAP08240 638 aaKnown RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 PCNAP12004 261 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 HSD17B1P14061 328 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 GPR1P46091 355 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 SOX9P48436 509 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 IRF8Q02556 426 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 ADRM1Q16186 407 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 MAPKAPK3Q16644 382 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 HNRNPA1L2Q32P51 320 aaKnown RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 PLEKHS1Q5SXH7 462 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 PRMT9Q6P2P2 845 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 CYP2U1Q7Z449 544 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 PLPP6Q8IY26 295 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 PLA2G15Q8NCC3 412 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 OR10A6Q8NH74 314 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 FNDC8Q8TC99 324 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 SLC13A3Q8WWT9 602 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 FAM129BQ96TA1 746 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 RPP25Q9BUL9 199 aaKnown RBP12.07□□□□□ -0.48
RNF4-201ENST00000314289 DNAJC11Q9NVH1 559 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 SMOXQ9NWM0 555 aa12.07□□□□□ -0.48
RNF4-201ENST00000314289 SLC28A1O00337 649 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 SOCS2O14508 198 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 ATG13O75143 517 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 RB1P06400 928 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 PGRP06401 933 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 ADRB3P13945 408 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 SLC6A12P48065 614 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 CDK9P50750 372 aaKnown RBP12.06□□□□□ -0.48
RNF4-201ENST00000314289 PHC1P78364 1004 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 CACHD1Q5VU97 1274 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 ANKRD26P1Q6NSI1 321 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 TRIM46Q7Z4K8 759 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 HID1Q8IV36 788 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 FAM47BQ8NA70 645 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 OR10Q1Q8NGQ4 319 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 USP7Q93009 1102 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 OR52E6Q96RD3 313 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 CGREF1Q99674 301 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 FAM83CQ9BQN1 747 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 EBF1Q9UH73 591 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 TMX2-CTNND1H3BSU7 103 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 SLCO2B1O94956 709 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 NFATC1O95644 943 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 PRNPP04156 253 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 HRH2P25021 359 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 NFKBIAP25963 317 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 DCDC1P59894 354 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 GRIK2Q13002 908 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 KIAA0040Q15053 153 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 AGTRAPQ6RW13 159 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 ZBTB46Q86UZ6 589 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 THOC6Q86W42 341 aaKnown RBP12.06□□□□□ -0.48
RNF4-201ENST00000314289 C10orf111Q8N326 155 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 OR8D1Q8WZ84 308 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 DTD2Q96FN9 168 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 OR4K3Q96R72 315 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 ACTR3BQ9P1U1 418 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 HCN2Q9UL51 889 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 NEUROG3Q9Y4Z2 214 aa12.06□□□□□ -0.48
RNF4-201ENST00000314289 CFAP20Q9Y6A4 193 aaKnown RBP12.06□□□□□ -0.48
RNF4-201ENST00000314289 CXorf51AA0A1B0GTR3 108 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 TSPAN11A1L157 253 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PSMA4P25789 261 aaKnown RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 MAGEA10P43363 369 aaPredicted RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 MEF2AQ02078 507 aaPredicted RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 STARD3Q14849 445 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 ANKDD1AQ495B1 522 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 USP39Q53GS9 565 aaKnown RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 PYCR3Q53H96 274 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 EGFLAMQ63HQ2 1017 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 VITQ6UXI7 678 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 TRMT11Q7Z4G4 463 aaKnown RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 ADGRG5Q8IZF4 528 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 DOCK8Q8NF50 2099 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 FIG4Q92562 907 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 GTF2H4Q92759 462 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 KLK6Q92876 244 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 NUS1Q96E22 293 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PKP4Q99569 1192 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 ZBTB18Q99592 522 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 CCM2Q9BSQ5 444 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 INPP5KQ9BT40 448 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 SLC25A37Q9NYZ2 338 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 KIF26AQ9ULI4 1882 aaPredicted RBP12.05□□□□□ -0.48
RNF4-201ENST00000314289 PLAGL1Q9UM63 463 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 SLC27A6Q9Y2P4 619 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 H3BM21 787 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 H3BNH8 94 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 SCAMP1O15126 338 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 JAK1P23458 1154 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 PRKCQQ04759 706 aa12.05□□□□□ -0.48
RNF4-201ENST00000314289 NFE2L1Q14494 772 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms