RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 SPATA9Q9BWV2 254 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 CWH43Q9H720 699 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 AASDHPPTQ9NRN7 309 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 VNN3Q9NY84 501 aa13.49□□□□□ -0.25
MKS1-201ENST00000313863 PDP1Q9P0J1 537 aaPredicted RBP13.49□□□□□ -0.25
MKS1-201ENST00000313863 B4GALT3O60512 393 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 PRAMEF1O95521 474 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 FUT4P22083 530 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ALDH4A1P30038 563 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 EIF2DP41214 584 aaKnown RBP13.48□□□□□ -0.25
MKS1-201ENST00000313863 ALDH7A1P49419 539 aaKnown RBP13.48□□□□□ -0.25
MKS1-201ENST00000313863 NCS1P62166 190 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ELP6Q0PNE2 266 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 PGS1Q32NB8 556 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 INAVAQ3KP66 663 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 GGTA1PQ4G0N0 100 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ARMC12Q5T9G4 340 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 DOK6Q6PKX4 331 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 MACC1Q6ZN28 852 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 SLC24A5Q71RS6 500 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 LRRC70Q7Z2Q7 622 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ATG16L2Q8NAA4 619 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 CLHC1Q8NHS4 586 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 SELENOMQ8WWX9 145 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 STARD8Q92502 1023 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 MYDGFQ969H8 173 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 HERC2P3Q9BVR0 1158 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 TTLL2Q9BWV7 592 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ACPTQ9BZG2 426 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 DCSTAMPQ9H295 470 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 TNKS2Q9H2K2 1166 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 SLC32A1Q9H598 525 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ELOVL6Q9H5J4 265 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ASB8Q9H765 288 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 KLHL42Q9P2K6 505 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 NOD1Q9Y239 953 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 SAMHD1Q9Y3Z3 626 aaKnown RBP13.48□□□□□ -0.25
MKS1-201ENST00000313863 PCDHB9Q9Y5E1 797 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 SLC38A8A6NNN8 435 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 NPIPB8E9PQR5 432 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 AREL1O15033 823 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 FZD6O60353 706 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 PRMT3O60678 531 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 MYO1DO94832 1006 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 PABPC1P11940 636 aaKnown RBP13.48□□□□□ -0.25
MKS1-201ENST00000313863 ITGB6P18564 788 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 PTPN6P29350 595 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 GDF5P43026 501 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ITGA1P56199 1179 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 RHOAP61586 193 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 AP1S1P61966 158 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 NKX3-2P78367 333 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 SRSF11Q05519 484 aaKnown RBP13.48□□□□□ -0.25
MKS1-201ENST00000313863 GBX1Q14549 363 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 NDUFA5Q16718 116 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 PHKG1Q16816 387 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 DUOXA1Q1HG43 343 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 VMACQ2NL98 169 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 GPR33Q49SQ1 333 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 GPRC6AQ5T6X5 926 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 DEPDC1Q5TB30 811 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 FAM171A1Q5VUB5 890 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 FAM151BQ6UXP7 276 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 USP43Q70EL4 1123 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 CEP68Q76N32 757 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 EIF3MQ7L2H7 374 aaKnown RBP13.48□□□□□ -0.25
MKS1-201ENST00000313863 DENND1CQ8IV53 801 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 P3H2Q8IVL5 708 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 AMER2Q8N7J2 671 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 PSMA8Q8TAA3 256 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 CSGALNACT1Q8TDX6 532 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 OVCA2Q8WZ82 227 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 MYO19Q96H55 970 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 TXNDC15Q96J42 360 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 HTATIP2Q9BUP3 242 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 SLC6A13Q9NSD5 602 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 KCTD5Q9NXV2 234 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 DNMT3BQ9UBC3 853 aaKnown RBP13.48□□□□□ -0.25
MKS1-201ENST00000313863 ABCG2Q9UNQ0 655 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 ERVK-11Q9UQG0 969 aa13.48□□□□□ -0.25
MKS1-201ENST00000313863 PABPN1LA6NDY0 278 aaKnown RBP13.47□□□□□ -0.25
MKS1-201ENST00000313863 ZBBXA8MT70 800 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 H7C4K7 107 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 EIF3FO00303 357 aaPredicted RBP13.47□□□□□ -0.25
MKS1-201ENST00000313863 EPN2O95208 641 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 PDYNP01213 254 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 C9P02748 559 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 SEMG1P04279 462 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 S100A1P23297 94 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 KRT20P35900 424 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 KIR3DL1P43629 444 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 PHC1P78364 1004 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 NPRL3Q12980 569 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 NFATC2Q13469 925 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 BOP1Q14137 746 aaKnown RBP13.47□□□□□ -0.25
MKS1-201ENST00000313863 ARHGEF7Q14155 803 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 CLLU1OSQ5K130 101 aa13.47□□□□□ -0.25
MKS1-201ENST00000313863 ZCCHC8Q6NZY4 707 aaKnown RBP13.47□□□□□ -0.25
MKS1-201ENST00000313863 FAHD1Q6P587 224 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms