RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 HNRNPA2B1P22626 353 aaKnown RBP16.2■□□□□ 0.18
CLCF1-201ENST00000312438 RPL10P27635 214 aaKnown RBP16.2■□□□□ 0.18
CLCF1-201ENST00000312438 DPP6P42658 865 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 ZFP36L2P47974 494 aaKnown RBP16.2■□□□□ 0.18
CLCF1-201ENST00000312438 KIAA1024LP59773 190 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 ZNF423Q2M1K9 1284 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 C8orf82Q6P1X6 216 aaPredicted RBP16.2■□□□□ 0.18
CLCF1-201ENST00000312438 SLCO4C1Q6ZQN7 724 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 SYT13Q7L8C5 426 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 RETREG3Q86VR2 466 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 FLCNQ8NFG4 579 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 NEIL2Q969S2 332 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 CMTM7Q96FZ5 175 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 TRIT1Q9H3H1 467 aaKnown RBP16.2■□□□□ 0.18
CLCF1-201ENST00000312438 CCDC177Q9NQR7 707 aaPredicted RBP16.2■□□□□ 0.18
CLCF1-201ENST00000312438 TMED5Q9Y3A6 229 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 POLR3HQ9Y535 204 aaPredicted RBP16.2■□□□□ 0.18
CLCF1-201ENST00000312438 ANKRD12Q6UB98 2062 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 TRPM6Q9BX84 2022 aa16.2■□□□□ 0.18
CLCF1-201ENST00000312438 ZNF839A8K0R7 811 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 CHURC1-FNTBB4DL54 471 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 ANKRD28O15084 1053 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 SORBS2O94875 1100 aaKnown RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 PSMG1O95456 288 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 IDSP22304 550 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 ME2P23368 584 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 JAK1P23458 1154 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 IL12AP29459 219 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 CLDN2P57739 230 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 PRKCQQ04759 706 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 CSTF3Q12996 717 aaKnown RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 HABP4Q5JVS0 413 aaKnown RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 LAYNQ6UX15 382 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 Q6ZS52 159 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 CCDC124Q96CT7 223 aaKnown RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 WDR34Q96EX3 536 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 BMFQ96LC9 184 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 OSGEPL1Q9H4B0 414 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 EHD1Q9H4M9 534 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 LMAN1LQ9HAT1 526 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 SPAG4Q9NPE6 437 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 ADA2Q9NZK5 511 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 LEF1Q9UJU2 399 aaPredicted RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 TDRKHQ9Y2W6 561 aaKnown RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 C9JVG2 144 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 APBB3O95704 486 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 SEMA4FO95754 770 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 IGLV3-19P01714 112 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 C1GALT1C1LP0DN25 315 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 HSD3B1P14060 373 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 FOSL2P15408 326 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 HSD3B2P26439 372 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 HTR1BP28222 390 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 TSTA3Q13630 321 aaPredicted RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 CEACAM7Q14002 265 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 CCDC6Q16204 474 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 PUS10Q3MIT2 529 aaKnown RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 ATG9BQ674R7 924 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 FAM9CQ8IZT9 166 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 MINDY1Q8N5J2 469 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 VPS33AQ96AX1 596 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 REPS1Q96D71 796 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 INSM2Q96T92 566 aaPredicted RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 ZBTB18Q99592 522 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 EFCAB11Q9BUY7 163 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 ACTL8Q9H568 366 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 NKX1-2Q9UD57 310 aaPredicted RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 KCNK6Q9Y257 313 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 WDR37Q9Y2I8 494 aa16.19■□□□□ 0.18
CLCF1-201ENST00000312438 MRPS17Q9Y2R5 130 aaKnown RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 CFAP20Q9Y6A4 193 aaKnown RBP16.19■□□□□ 0.18
CLCF1-201ENST00000312438 PRSS38A1L453 326 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 PRR19A6NJB7 356 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 LATO43561 262 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 EEDO75530 441 aaKnown RBP16.18■□□□□ 0.18
CLCF1-201ENST00000312438 NPPAP01160 153 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 ERGP11308 486 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 PRPS2P11908 318 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 ACPPP15309 386 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 MAPK1P28482 360 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 AKT2P31751 481 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 THOP1P52888 689 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 LRRC32Q14392 662 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 NFATC4Q14934 902 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 TLR1Q15399 786 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 USP39Q53GS9 565 aaKnown RBP16.18■□□□□ 0.18
CLCF1-201ENST00000312438 PAGE2BQ5JRK9 111 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 C10orf62Q5T681 223 aaPredicted RBP16.18■□□□□ 0.18
CLCF1-201ENST00000312438 THEMIS2Q5TEJ8 643 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 MED27Q6P2C8 311 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 PRMT9Q6P2P2 845 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 SUSD1Q6UWL2 747 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 LCTLQ6UWM7 567 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 ENPP7Q6UWV6 458 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 ZNF687Q8N1G0 1237 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 LIX1Q8N485 282 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 GLB1L3Q8NCI6 653 aaPredicted RBP16.18■□□□□ 0.18
CLCF1-201ENST00000312438 JADE3Q92613 823 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 METTL2AQ96IZ6 378 aaKnown RBP16.18■□□□□ 0.18
CLCF1-201ENST00000312438 C12orf66Q96MD2 445 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms