RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TKTL1P51854 596 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SLC5A3P53794 718 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ATXN3P54252 364 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 EPHB1P54762 984 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 RRADP55042 308 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 NR1H2P55055 460 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 AQP4P55087 323 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 CLDN6P56747 220 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SESN2P58004 480 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 DNAJB13P59910 316 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 COG7P83436 770 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 PPIDQ08752 370 aaKnown RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 GALNT1Q10472 559 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 STX5Q13190 355 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SLC14A1Q13336 389 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 MPP3Q13368 585 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 MTM1Q13496 603 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SLC12A1Q13621 1099 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 LAMB3Q13751 1172 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ENPP2Q13822 863 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 FLOT2Q14254 428 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 CNGA3Q16281 694 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ANO4Q32M45 955 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 GRAMD1BQ3KR37 738 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 FUT11Q495W5 492 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 LRRC23Q53EV4 343 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 RAB6CQ53S08 254 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 PIGGQ5H8A4 983 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 HECTD3Q5T447 861 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SEL1L3Q68CR1 1132 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TMEM215Q68D42 235 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 KCTD11Q693B1 232 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 LAYNQ6UX15 382 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 HACD2Q6Y1H2 254 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SLC36A4Q6YBV0 504 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TPGS1Q6ZTW0 290 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 HTR3DQ70Z44 454 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 PIWIL4Q7Z3Z4 852 aaKnown RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ARPINQ7Z6K5 226 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 STRA8Q7Z7C7 330 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ACOT1Q86TX2 421 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SPATA24Q86W54 205 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 HPS6Q86YV9 775 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 CNTN4Q8IWV2 1026 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF567Q8N184 647 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 AFAP1L2Q8N4X5 818 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 STPG3Q8N7X2 389 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 C12orf29Q8N999 325 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 OR6B3Q8NGW1 331 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 GABPB2Q8TAK5 448 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 FAM81AQ8TBF8 368 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 PHOSPHO1Q8TCT1 267 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 RNF139Q8WU17 664 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 STYXQ8WUJ0 223 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 FBXO32Q969P5 355 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 OTUB2Q96DC9 234 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 CCDC126Q96EE4 140 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 DCUN1D1Q96GG9 259 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 LRIG1Q96JA1 1093 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 HIC2Q96JB3 615 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 MAELQ96JY0 434 aaKnown RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 LRGUKQ96M69 825 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 FAM210AQ96ND0 272 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TSGA13Q96PP4 275 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 LENG8Q96PV6 779 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 NPY6RQ99463 290 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 HNRNPABQ99729 332 aaKnown RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ORAI3Q9BRQ5 295 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 HAUS8Q9BT25 410 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 KIFC1Q9BW19 673 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 GATA5Q9BWX5 397 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 GPR174Q9BXC1 333 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ACE2Q9BYF1 805 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SLC2A11Q9BYW1 496 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 RAB6CQ9H0N0 254 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 GBA3Q9H227 469 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SNX25Q9H3E2 840 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 RHOJQ9H4E5 214 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 C8orf4Q9NR00 106 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SYBUQ9NX95 663 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 WSB2Q9NYS7 404 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 USP36Q9P275 1121 aaKnown RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TBC1D14Q9P2M4 693 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 DEC1Q9P2X7 70 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 DKK4Q9UBT3 224 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 RIMS3Q9UJD0 308 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 FBXO10Q9UK96 956 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TLK1Q9UKI8 766 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 SARDHQ9UL12 918 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 DMTF1Q9Y222 760 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 PSAT1Q9Y617 370 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 PRRC2CQ9Y520 2896 aaKnown RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 LRRK2Q5S007 2527 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 A0A1B0GVT2 93 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 TRABD2BA6NFA1 517 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 MEI4A8MW99 385 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 TARM1B6A8C7 271 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 NEDD8-MDP1E9PL57 170 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF701M0R085 212 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms