RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PHKG1Q16816 387 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PRAMEF13Q5VWM6 474 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 WDR93Q6P2C0 686 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KLC3Q6P597 504 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 AGTRAPQ6RW13 159 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MBOAT1Q6ZNC8 495 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 LMNTD1Q8N9Z9 388 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KDF1Q8NAX2 398 aaPredicted RBP10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 OR2L3Q8NG85 312 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ZNF480Q8WV37 535 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ANKRD49Q8WVL7 239 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ALKBH8Q96BT7 664 aaKnown RBP10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NAF1Q96HR8 494 aaKnown RBP10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ULBP3Q9BZM4 244 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 UNKQ9C0B0 810 aaKnown RBP10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC7A5P2Q9GIP4 190 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PCBD2Q9H0N5 130 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 NMRAL1Q9HBL8 299 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 APMAPQ9HDC9 416 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MRPS30Q9NP92 439 aaKnown RBP10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SNX15Q9NRS6 342 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TAC3Q9UHF0 121 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ZNF180Q9UJW8 692 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 OARD1Q9Y530 152 aa10.6□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 A0A096LPK6 155 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 IQANK1A0A1B0GTG1 560 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 E7ENX8 843 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TLX3O43711 291 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SNRPAP09012 282 aaKnown RBP10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 LTA4HP09960 611 aaKnown RBP10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SLC35E2BP0CK96 405 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 LIPCP11150 499 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FGF5P12034 268 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CD1DP15813 335 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CDKL1Q00532 357 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TAP2Q03519 686 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ST3GAL2Q16842 350 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FAM83EQ2M2I3 478 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ERCC6LQ2NKX8 1250 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ZC3H12BQ5HYM0 836 aaKnown RBP10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 BROXQ5VW32 411 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 KIAA1614Q5VZ46 1190 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ICE2Q659A1 982 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 CAPN13Q6MZZ7 669 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 EMBQ6PCB8 327 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SBSNQ6UWP8 590 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ADCK2Q7Z695 626 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TMEM126BQ8IUX1 230 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FAM20CQ8IXL6 584 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 GPR135Q8IZ08 494 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TCAIMQ8N3R3 496 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FLVCR1-AS1Q8TAF5 88 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 DCAKDQ8WVC6 231 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 DLG3Q92796 817 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 EXT2Q93063 718 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PMEPA1Q969W9 287 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ZUFSPQ96AP4 578 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FBXL8Q96CD0 374 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 MTBPQ96DY7 904 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TXLNGYQ9BZA5 131 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 TWSG1Q9GZX9 223 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ATG10Q9H0Y0 220 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 VPS11Q9H270 941 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PPCSQ9HAB8 311 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ANKMY1Q9P2S6 941 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 PSMC3IPQ9P2W1 217 aaPredicted RBP10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 FETUBQ9UGM5 382 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ACSL6Q9UKU0 697 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ZMIZ1Q9ULJ6 1067 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 RNF112Q9ULX5 631 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 RAXQ9Y2V3 346 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 ACOT9Q9Y305 439 aa10.59□□□□□ -0.71
CSPG4P1Y-201ENST00000306641 SPTBP11277 2137 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 A0A1W2PPV9 198 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TARM1B6A8C7 271 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TRIM49D1C9J1S8 452 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 E7EQ34 232 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PRICKLE3O43900 615 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 STK17BO94768 372 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KIAA0754O94854 1291 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 WISP3O95389 354 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 MT-ND3P03897 115 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 C2P06681 752 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TUBBP07437 444 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 MSL3P1P0C860 447 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SLC26A3P40879 764 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 HNMTP50135 292 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ITGA1P56199 1179 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ABATP80404 500 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NAE1Q13564 534 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TGFBIQ15582 683 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PPP1R3AQ16821 1122 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DEFB110Q30KQ9 67 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 FIGLAQ6QHK4 219 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CDHR3Q6ZTQ4 885 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 C17orf64Q86WR6 236 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GPSM1Q86YR5 675 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SPATA6LQ8N4H0 392 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms