RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TGDSO95455 350 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CSNK2A2P19784 350 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ME2P23368 584 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 RPA4Q13156 261 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 KIR2DS5Q14953 304 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 TGFBIQ15582 683 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 SLC29A4Q7RTT9 530 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ZDHHC14Q8IZN3 488 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 KDM1BQ8NB78 822 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ADAMTS19Q8TE59 1207 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 RNF145Q96MT1 663 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CDK15Q96Q40 435 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 MTMR10Q9NXD2 777 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 LGALS13Q9UHV8 139 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 RPS6KA6Q9UK32 745 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 BLOC1S6Q9UL45 172 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 FZD4Q9ULV1 537 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CA5BQ9Y2D0 317 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 A6NCN8 305 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 LRRC14BA6NHZ5 514 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 GPR89AB7ZAQ6 455 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 SLC16A5O15375 505 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ALPPP05187 535 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 GPR89BP0CG08 455 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CALRP27797 417 aaKnown RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 LEPRP48357 1165 aaKnown RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 TPMTP51580 245 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 RACK1P63244 317 aaKnown RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 MRPS22P82650 360 aaKnown RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CDKN3Q16667 212 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 WLSQ5T9L3 541 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CAPRIN2Q6IMN6 1127 aaKnown RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ALKBH2Q6NS38 261 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 RBM12BQ8IXT5 1001 aaKnown RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 TBC1D21Q8IYX1 336 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 GDF15Q99988 308 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 SLC29A3Q9BZD2 475 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ZDHHC18Q9NUE0 388 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF358Q9NW07 568 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 LHX3Q9UBR4 397 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 PRSS38A1L453 326 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 WFS1O76024 890 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 PTPN4P29074 926 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CD68P34810 354 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ARSDP51689 593 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ACY1Q03154 408 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 RNF44Q7L0R7 432 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF572Q7Z3I7 529 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 LIX1Q8N485 282 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 DNAJC5GQ8N7S2 189 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 GPR26Q8NDV2 337 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ARRDC3Q96B67 414 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 SYT11Q9BT88 431 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 DPH7Q9BTV6 452 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CCDC134Q9H6E4 229 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 IFT80Q9P2H3 777 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CFL2Q9Y281 166 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 KLHL20Q9Y2M5 609 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 DLL1O00548 723 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 PIP5K1BO14986 540 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 AQP9O43315 295 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 PROCP04070 461 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 ZDHHC11BP0C7U3 371 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 CD27P26842 260 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 RGRP47804 291 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 RAB28P51157 221 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 HYAL2Q12891 473 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 UNC5DQ6UXZ4 953 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 CYP4Z2PQ8N1L4 340 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 METTL27Q8N6F8 245 aaPredicted RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 NACC2Q96BF6 587 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 IL17FQ96PD4 163 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 TMEM109Q9BVC6 243 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 SLC6A17Q9H1V8 727 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 GALPQ9UBC7 116 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 SCOCQ9UIL1 159 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 CAPN14A8MX76 684 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 H3BN98 237 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 REM1O75628 298 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 RPSAP08865 295 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF37AP17032 561 aaPredicted RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 LARS2Q15031 903 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 DUOXA1Q1HG43 343 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 TRNP1Q6NT89 227 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 CYP2R1Q6VVX0 501 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 DHDDSQ86SQ9 333 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 KIAA2013Q8IYS2 634 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 COX18Q8N8Q8 333 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 DCAKDQ8WVC6 231 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 FBRSL1Q9HCM7 1045 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 SSU72Q9NP77 194 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 PRDM8Q9NQV8 689 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 SCN3BQ9NY72 215 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 MARCH4Q9P2E8 410 aaPredicted RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 DOCK3Q8IZD9 2030 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 A0A1B0GVT2 93 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 A8MT66 165 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 DEAF1O75398 565 aaPredicted RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 UBOX5O94941 541 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 S1PR4O95977 384 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms