RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 BPIFB1Q8TDL5 484 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 RPL3LQ92901 407 aaKnown RBP10.65□□□□□ -0.71
LSM3-201ENST00000306024 MAP6Q96JE9 813 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 CDCA3Q99618 268 aaPredicted RBP10.65□□□□□ -0.71
LSM3-201ENST00000306024 RBM4BQ9BQ04 359 aaKnown RBP10.65□□□□□ -0.71
LSM3-201ENST00000306024 TBL1YQ9BQ87 522 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 CHCHD6Q9BRQ6 235 aa10.65□□□□□ -0.71
LSM3-201ENST00000306024 RBM4Q9BWF3 364 aaKnown RBP10.65□□□□□ -0.71
LSM3-201ENST00000306024 I6L893 689 aaPredicted RBP10.64□□□□□ -0.71
LSM3-201ENST00000306024 IPO13O94829 963 aaKnown RBP10.64□□□□□ -0.71
LSM3-201ENST00000306024 NFATC1O95644 943 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 NDST3O95803 873 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 IGLV3-25P01717 112 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 LINC00032P0C843 101 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 PRKACGP22612 351 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 HNF4AP41235 474 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 ZNF267Q14586 743 aaPredicted RBP10.64□□□□□ -0.71
LSM3-201ENST00000306024 PON2Q15165 354 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 CATSPEREQ5SY80 951 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 ZNF534Q76KX8 674 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 UMODL1-AS1Q8N2C9 162 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 METTL4Q8N3J2 472 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 SIMC1Q8NDZ2 872 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 STYXQ8WUJ0 223 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 PHF21AQ96BD5 680 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 MTERF3Q96E29 417 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 FCRL3Q96P31 734 aaPredicted RBP10.64□□□□□ -0.71
LSM3-201ENST00000306024 ZBTB18Q99592 522 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 ALG9Q9H6U8 611 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 IL21Q9HBE4 155 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 PLSCR3Q9NRY6 295 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 KCNN3Q9UGI6 736 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 ATP6V1HQ9UI12 483 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 PEX16Q9Y5Y5 336 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 LOC100130705A0A1B0GUX0 176 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 MAGEB16A2A368 324 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 LILRB3O75022 631 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 DNAJB5O75953 348 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 NAT2P11245 290 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 PSKH1P11801 424 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 EIF2DP41214 584 aaKnown RBP10.64□□□□□ -0.71
LSM3-201ENST00000306024 MADCAM1Q13477 382 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 SELPLGQ14242 412 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 SLX4IPQ5VYV7 408 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 RTL10Q7L3V2 364 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 PROSER1Q86XN7 944 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 SDR16C5Q8N3Y7 309 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 HEXDCQ8WVB3 486 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 TMCO6Q96DC7 493 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 LRCH3Q96II8 777 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 BRD9Q9H8M2 597 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 FAM118AQ9NWS6 357 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 DEC1Q9P2X7 70 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 SLCO3A1Q9UIG8 710 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 LEF1Q9UJU2 399 aaPredicted RBP10.64□□□□□ -0.71
LSM3-201ENST00000306024 UBXN8O00124 270 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 STK25O00506 426 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 IGSF6O95976 241 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 SNRPD2P62316 118 aaKnown RBP10.64□□□□□ -0.71
LSM3-201ENST00000306024 NADSYN1Q6IA69 706 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 KLHL17Q6TDP4 642 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 SCIMPQ6UWF3 145 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 DPY19L3Q6ZPD9 716 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 TXNDC5Q8NBS9 432 aaKnown RBP10.64□□□□□ -0.71
LSM3-201ENST00000306024 MUL1Q969V5 352 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 TSPAN17Q96FV3 270 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 AURKBQ96GD4 344 aaPredicted RBP10.64□□□□□ -0.71
LSM3-201ENST00000306024 KCNS3Q9BQ31 491 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 GPR63Q9BZJ6 419 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 MUC13Q9H3R2 512 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 PLAC1Q9HBJ0 212 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 DYRK4Q9NR20 520 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 CD300AQ9UGN4 299 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 MAGEL2Q9UJ55 1249 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 FRMPD3Q5JV73 1810 aa10.64□□□□□ -0.71
LSM3-201ENST00000306024 HLA-DQB2P05538 268 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 PIRTP0C851 137 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 IL7P13232 177 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 RAB14P61106 215 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 SEMA3BQ13214 749 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 PLEKHG6Q3KR16 790 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 PDZK1Q5T2W1 519 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 CLYBLQ8N0X4 340 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 CAMKK1Q8N5S9 505 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 CSGALNACT1Q8TDX6 532 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 PHF10Q8WUB8 498 aaKnown RBP10.63□□□□□ -0.71
LSM3-201ENST00000306024 SLC30A3Q99726 388 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 LINC00597Q9H2U6 94 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 AKTIPQ9H8T0 292 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 CMTM6Q9NX76 183 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 FCF1Q9Y324 198 aaKnown RBP10.63□□□□□ -0.71
LSM3-201ENST00000306024 HSPB11Q9Y547 144 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 TTC24A2A3L6 582 aaPredicted RBP10.63□□□□□ -0.71
LSM3-201ENST00000306024 RAP2AP10114 183 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 TYRP14679 529 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 SPNP16150 400 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 SLC7A9P82251 487 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 ZNF45Q02386 682 aa10.63□□□□□ -0.71
LSM3-201ENST00000306024 EMX1Q04741 257 aaPredicted RBP10.63□□□□□ -0.71
LSM3-201ENST00000306024 CLCA4Q14CN2 919 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms